RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 NUP188Q5SRE5 1749 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 ONECUT3O60422 494 aaPredicted RBP8.67□□□□□ -1.02
GABRE-209ENST00000486255 IFNA21P01568 189 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 PSMA6P60900 246 aaKnown RBP8.67□□□□□ -1.02
GABRE-209ENST00000486255 TROAPQ12815 778 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 CPSF6Q16630 551 aaKnown RBP eCLIP8.67□□□□□ -1.023e-6■□□□□ 8.1
GABRE-209ENST00000486255 PLEKHG6Q3KR16 790 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 RFWD3Q6PCD5 774 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 COMTD1Q86VU5 262 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 C4orf19Q8IY42 314 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 MSANTD3Q96H12 275 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 DHRS1Q96LJ7 313 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 NMUR2Q9GZQ4 415 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 SAV1Q9H4B6 383 aaPredicted RBP8.67□□□□□ -1.02
GABRE-209ENST00000486255 HIF3AQ9Y2N7 669 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 MAP4K5Q9Y4K4 846 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 PCDHGB3Q9Y5G1 929 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 TLL2Q9Y6L7 1015 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 LTBP4Q8N2S1 1624 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 C12orf71A8MTZ7 269 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 LACTBL1A8MY62 500 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 IPO13O94829 963 aaKnown RBP8.67□□□□□ -1.02
GABRE-209ENST00000486255 TFPIP10646 304 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 CTSEP14091 401 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 AMD1P17707 334 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 PAX3P23760 479 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 ITPKBP27987 946 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 ZNF132P52740 706 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 SEMA5AQ13591 1074 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 VWA5B1Q5TIE3 1220 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 RASGEF1AQ8N9B8 481 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 OR5J2Q8NH18 312 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 SLC2A14Q8TDB8 520 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 DENND2DQ9H6A0 471 aaPredicted RBP8.67□□□□□ -1.02
GABRE-209ENST00000486255 LRTM1Q9HBL6 345 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 N4BP2Q86UW6 1770 aaPredicted RBP8.67□□□□□ -1.02
GABRE-209ENST00000486255 TRIM64A6NGJ6 449 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 LINGO3P0C6S8 592 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 PVALBP20472 110 aaPredicted RBP8.67□□□□□ -1.02
GABRE-209ENST00000486255 OR3A3P47888 321 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 OR3A2P47893 321 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 CTBP1Q13363 440 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 ALG1LQ6GMV1 187 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 RAET1GQ6H3X3 334 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 KLHL36Q8N4N3 616 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 UBR7Q8N806 425 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 OR4L1Q8NH43 312 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 OR5K1Q8NHB7 308 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 PPM1MQ96MI6 270 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 KXD1Q9BQD3 176 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 A0A087X0B3 334 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 hCG_2039718K7EN88 272 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 SCELO95171 688 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 CD247P20963 164 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 S100PP25815 95 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 ICAM3P32942 547 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 RAB27AP51159 221 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 LIMK2P53671 638 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 GNA12Q03113 381 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 UBAP2Q5T6F2 1119 aaKnown RBP8.67□□□□□ -1.02
GABRE-209ENST00000486255 FBXL19Q6PCT2 694 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 POMZP3Q6PJE2 187 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 ZYG11AQ6WRX3 759 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 PAQR7Q86WK9 346 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 ANKRD52Q8NB46 1076 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 OR2L8Q8NGY9 312 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 DUSP9Q99956 384 aaKnown RBP8.67□□□□□ -1.02
GABRE-209ENST00000486255 BRD7Q9NPI1 651 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 MTRRQ9UBK8 725 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 TCRBV9S1A1TA0A576 114 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 ADAMDEC1O15204 470 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 HCN1O60741 890 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 IFNA2P01563 188 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 DRG2P55039 364 aaKnown RBP8.67□□□□□ -1.02
GABRE-209ENST00000486255 CDH12P55289 794 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 RAB5BP61020 215 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 FSTL1Q12841 308 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 PEX6Q13608 980 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 UAP1L1Q3KQV9 507 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 SCGB2B2Q4G0G5 96 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 SH3D19Q5HYK7 790 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 PITRM1Q5JRX3 1037 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 TOR1AIP1Q5JTV8 583 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 RAP1GAP2Q684P5 730 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 ALKBH2Q6NS38 261 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 TXNRD3Q86VQ6 643 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 GJD3Q8N144 294 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 HSPBAP1Q96EW2 488 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 ZNF649Q9BS31 505 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 PRRG4Q9BZD6 226 aa8.67□□□□□ -1.02
GABRE-209ENST00000486255 UXTQ9UBK9 157 aaPredicted RBP8.67□□□□□ -1.02
GABRE-209ENST00000486255 CABYRO75952 493 aa8.66□□□□□ -1.02
GABRE-209ENST00000486255 VNN2O95498 520 aa8.66□□□□□ -1.02
GABRE-209ENST00000486255 IFNW1P05000 195 aa8.66□□□□□ -1.02
GABRE-209ENST00000486255 MERTKQ12866 999 aa8.66□□□□□ -1.02
GABRE-209ENST00000486255 NFE2Q16621 373 aaPredicted RBP8.66□□□□□ -1.02
GABRE-209ENST00000486255 TPRG1LQ5T0D9 272 aa8.66□□□□□ -1.02
GABRE-209ENST00000486255 ROPN1LQ96C74 230 aa8.66□□□□□ -1.02
GABRE-209ENST00000486255 CXorf40BQ96DE9 158 aa8.66□□□□□ -1.02
GABRE-209ENST00000486255 KCTD7Q96MP8 289 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms