RNA–Protein interactions for RNA: ENST00000485532.1

PRAME-212, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 3

Gene PRAME, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-212ENST00000485532 CCDC70Q6NSX1 233 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 IRGCQ6NXR0 463 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 FAM151BQ6UXP7 276 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 FAM83HQ6ZRV2 1179 aaPredicted RBP12.39□□□□□ -0.43
PRAME-212ENST00000485532 TMEM135Q86UB9 458 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 CREG2Q8IUH2 290 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 RASGEF1CQ8N431 466 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 RASGEF1AQ8N9B8 481 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 TFB1MQ8WVM0 346 aaKnown RBP12.39□□□□□ -0.43
PRAME-212ENST00000485532 COL26A1Q96A83 441 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 CXorf40BQ96DE9 158 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 OXNAD1Q96HP4 312 aaPredicted RBP12.39□□□□□ -0.43
PRAME-212ENST00000485532 MS4A14Q96JA4 679 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 MRGPRX2Q96LB1 330 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 VPS35Q96QK1 796 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 ZNF768Q9H5H4 540 aaKnown RBP12.39□□□□□ -0.43
PRAME-212ENST00000485532 SMARCAL1Q9NZC9 954 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 FAM153AQ9UHL3 310 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 CROTQ9UKG9 612 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 MRFAP1Q9Y605 127 aa12.39□□□□□ -0.43
PRAME-212ENST00000485532 hCG_1818297A0A087WSY0 165 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 K7EM74 188 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 GAPDHSO14556 408 aaPredicted RBP12.38□□□□□ -0.43
PRAME-212ENST00000485532 TIAF1O95411 115 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 TCN2P20062 427 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 IDSP22304 550 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 PBLDP30039 288 aaPredicted RBP12.38□□□□□ -0.43
PRAME-212ENST00000485532 HMGCLP35914 325 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 DLSTP36957 453 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 CAPZBP47756 277 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 COPS2P61201 443 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 IGFBP7Q16270 282 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 PPP2R5EQ16537 467 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 AGAP9Q5VTM2 703 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 CACHD1Q5VU97 1274 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 RASGRP3Q8IV61 690 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 CCDC50Q8IVM0 306 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 ZNF567Q8N184 647 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 ESX1Q8N693 406 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 AVL9Q8NBF6 648 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 IPMKQ8NFU5 416 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 BLOC1S5Q8TDH9 187 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 ABHD17AQ96GS6 310 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 CAPZA3Q96KX2 299 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 CATSPER2Q96P56 530 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 POT1Q9NUX5 634 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 IL17CQ9P0M4 197 aa12.38□□□□□ -0.43
PRAME-212ENST00000485532 KLHL8Q9P2G9 620 aaPredicted RBP12.38□□□□□ -0.43
PRAME-212ENST00000485532 TTC7AQ9ULT0 858 aaPredicted RBP12.38□□□□□ -0.43
PRAME-212ENST00000485532 CFAP20Q9Y6A4 193 aaKnown RBP12.38□□□□□ -0.43
PRAME-212ENST00000485532 IGHV5-51A0A0C4DH38 117 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 TCRBV7S2A1N4TA0A589 114 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 OR2AG2A6NM03 316 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 KATNA1O75449 491 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 SPAG6O75602 509 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 POP7O75817 140 aaKnown RBP12.37□□□□□ -0.43
PRAME-212ENST00000485532 FGGP02679 453 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 NR2C2P49116 596 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 OLIG2Q13516 323 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 TUBB2AQ13885 445 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 GTF2H3Q13889 308 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 TFDP2Q14188 446 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 ERV3-1Q14264 604 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 NFE2L1Q14494 772 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 KCNAB1Q14722 419 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 SLC1A5Q15758 541 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 TMEM220Q6QAJ8 160 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 C6orf15Q6UXA7 325 aaPredicted RBP12.37□□□□□ -0.43
PRAME-212ENST00000485532 WASH2PQ6VEQ5 465 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 CERS6Q6ZMG9 384 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 MICALCLQ6ZW33 695 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 DET1Q7L5Y6 550 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 PID1Q7Z2X4 250 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 PRSS42Q7Z5A4 293 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 SLC13A5Q86YT5 568 aaPredicted RBP12.37□□□□□ -0.43
PRAME-212ENST00000485532 BEND7Q8N7W2 519 aaPredicted RBP12.37□□□□□ -0.43
PRAME-212ENST00000485532 C9orf43Q8TAL5 461 aaPredicted RBP12.37□□□□□ -0.43
PRAME-212ENST00000485532 ACTRT1Q8TDG2 376 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 KLHL6Q8WZ60 621 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 RUFY1Q96T51 708 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 GORASP1Q9BQQ3 440 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 TUBB2BQ9BVA1 445 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 HEMGNQ9BXL5 484 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 OSBPL8Q9BZF1 889 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 TRIT1Q9H3H1 467 aaKnown RBP12.37□□□□□ -0.43
PRAME-212ENST00000485532 AKIRIN1Q9H9L7 192 aaPredicted RBP12.37□□□□□ -0.43
PRAME-212ENST00000485532 L2HGDHQ9H9P8 463 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 WASH6PQ9NQA3 447 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 FAM8A1Q9UBU6 413 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 LNPEPQ9UIQ6 1025 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 TUBD1Q9UJT1 453 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 PTPN13Q12923 2485 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 MAST4O15021 2626 aa12.37□□□□□ -0.43
PRAME-212ENST00000485532 PGRMC1O00264 195 aaKnown RBP12.36□□□□□ -0.43
PRAME-212ENST00000485532 AGTP01019 485 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 FOLR1P15328 257 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 SPAM1P38567 509 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 CETN2P41208 172 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 KLF1Q13351 362 aaPredicted RBP12.36□□□□□ -0.43
PRAME-212ENST00000485532 MAP7Q14244 749 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms