RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 CERS1P27544 350 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 STX1BP61266 288 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 ZNF91Q05481 1191 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 LASP1Q14847 261 aaKnown RBP4.42□□□□□ -1.7
VPS13A-211ENST00000484581 UGCGQ16739 394 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 CDO1Q16878 200 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 DNTTIP2Q5QJE6 756 aaKnown RBP4.42□□□□□ -1.7
VPS13A-211ENST00000484581 RAB12Q6IQ22 244 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 C11orf87Q6NUJ2 197 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 DUS1LQ6P1R4 473 aaKnown RBP4.42□□□□□ -1.7
VPS13A-211ENST00000484581 FIGLAQ6QHK4 219 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 PARM1Q6UWI2 310 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 ZNF534Q76KX8 674 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 MON1BQ7L1V2 547 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 NUP54Q7Z3B4 507 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 ERC1Q8IUD2 1116 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 KLHL7Q8IXQ5 586 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 PM20D2Q8IYS1 436 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 AADATQ8N5Z0 425 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 PCDH20Q8N6Y1 951 aaKnown RBP4.42□□□□□ -1.7
VPS13A-211ENST00000484581 EMC1Q8N766 993 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 OCC1Q8TAD7 63 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 SPATA20Q8TB22 786 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 TMEM174Q8WUU8 243 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 DNASE1L2Q92874 299 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 ATP6V0A1Q93050 837 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 ZBTB9Q96C00 473 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 ERLEC1Q96DZ1 483 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 SPDL1Q96EA4 605 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 AK8Q96MA6 479 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 MMTAG2Q9BU76 263 aaKnown RBP4.42□□□□□ -1.7
VPS13A-211ENST00000484581 POLDIP3Q9BY77 421 aaKnown RBP4.42□□□□□ -1.7
VPS13A-211ENST00000484581 SEMA4CQ9C0C4 833 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 FAM234AQ9H0X4 552 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 C17orf75Q9HAS0 396 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 TUFT1Q9NNX1 390 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 CNIH4Q9P003 139 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 STK26Q9P289 416 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 PCDHA12Q9UN75 941 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 PA2G4Q9UQ80 394 aaKnown RBP4.42□□□□□ -1.7
VPS13A-211ENST00000484581 PAM16Q9Y3D7 125 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 ABCC9O60706 1549 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 A0A1W2PPC1 479 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 A0A1W2PRV1 198 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 FEZF1A0PJY2 475 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 ANKUB1A6NFN9 424 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 FAM90A26D6RGX4 464 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 J3QR06 171 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 PPP6CO00743 305 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 CLDN4O14493 209 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 HSPA12AO43301 675 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 ZBTB14O43829 449 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 TSPAN1O60635 241 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 GCNT3O95395 438 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 OLFM2O95897 454 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 IGKV2-30P06310 120 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 GABRA5P31644 462 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 CRKLP46109 303 aaKnown RBP4.41□□□□□ -1.7
VPS13A-211ENST00000484581 HNRNPH2P55795 449 aaKnown RBP4.41□□□□□ -1.7
VPS13A-211ENST00000484581 P2RX3P56373 397 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 TAS2R38P59533 333 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 SSBP2P81877 361 aaPredicted RBP4.41□□□□□ -1.7
VPS13A-211ENST00000484581 RPA4Q13156 261 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 EFNB3Q15768 340 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 FAM109BQ6ICB4 259 aaPredicted RBP4.41□□□□□ -1.7
VPS13A-211ENST00000484581 SLC16A12Q6ZSM3 486 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 TLK2Q86UE8 772 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 DZIP1Q86YF9 867 aaKnown RBP4.41□□□□□ -1.7
VPS13A-211ENST00000484581 ANKRD13BQ86YJ7 626 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 FOXRED2Q8IWF2 684 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 DNAAF4Q8WXU2 420 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 RPL36ALQ969Q0 106 aaKnown RBP4.41□□□□□ -1.7
VPS13A-211ENST00000484581 MIB2Q96AX9 1013 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 RHBDF1Q96CC6 855 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 TBC1D31Q96DN5 1066 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 OR6C1Q96RD1 312 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 PARK7Q99497 189 aaKnown RBP4.41□□□□□ -1.7
VPS13A-211ENST00000484581 SEMA3CQ99985 751 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 KATNB1Q9BVA0 655 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 SPRY4Q9C004 299 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 SLC5A7Q9GZV3 580 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 TMEM184CQ9NVA4 438 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 DPP3Q9NY33 737 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 SEPT10Q9P0V9 454 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 RCC2Q9P258 522 aaKnown RBP4.41□□□□□ -1.7
VPS13A-211ENST00000484581 ITGA11Q9UKX5 1188 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 B3GALT5Q9Y2C3 310 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 GRIP1Q9Y3R0 1128 aa4.41□□□□□ -1.7
VPS13A-211ENST00000484581 ZMYM2Q9UBW7 1377 aa4.4□□□□□ -1.7
VPS13A-211ENST00000484581 A0A1W2PPQ1 181 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 C5orf52A6NGY3 159 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 HEPACAM2A8MVW5 462 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 FAM86B1E9PN63 330 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 MS4A18H0YCH9 400 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 TMEM189-UBE2V1I3L0A0 370 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 J3KR12 359 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 TIMM23O14925 209 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 PGRMC2O15173 223 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 TO15178 435 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 ASAP2O43150 1006 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms