RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 GPR89BP0CG08 455 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 MYF5P13349 255 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 VCLP18206 1134 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 TGM1P22735 817 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 LEPRP48357 1165 aaKnown RBP13□□□□□ -0.33
HDAC1-208ENST00000482310 BMPR2Q13873 1038 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 ZNF460Q14592 562 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 KLHL38Q2WGJ6 581 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 C11orf96Q7Z7L8 435 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 SLC26A11Q86WA9 606 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 GKN2Q86XP6 184 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 NRROSQ86YC3 692 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 CFAP206Q8IYR0 622 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 EID2Q8N6I1 236 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 SIDT2Q8NBJ9 832 aaKnown RBP13□□□□□ -0.33
HDAC1-208ENST00000482310 FAM46DQ8NEK8 389 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 ACVR1CQ8NER5 493 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 OR2W6PQ8NHA6 318 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 CAVIN3Q969G5 261 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 VPS39Q96JC1 886 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 ZNF514Q96K75 400 aaPredicted RBP13□□□□□ -0.33
HDAC1-208ENST00000482310 BIRC8Q96P09 236 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 PAFAH2Q99487 392 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 CPNE1Q99829 537 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 PRDM8Q9NQV8 689 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 NSMCE4AQ9NXX6 385 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 TAAR2Q9P1P5 351 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 GALPQ9UBC7 116 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 GPR34Q9UPC5 381 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 PCDHB1Q9Y5F3 818 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 NCOR2Q9Y618 2525 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 MGAT4DA6NG13 374 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 CDX4O14627 284 aaPredicted RBP12.99□□□□□ -0.33
HDAC1-208ENST00000482310 YY2O15391 372 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 CTIFO43310 598 aaKnown RBP12.99□□□□□ -0.33
HDAC1-208ENST00000482310 ERLIN1O75477 346 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 EML2O95834 649 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 ESR1P03372 595 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 INHBAP08476 426 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 RPS3P23396 243 aaKnown RBP eCLIP12.99□□□□□ -0.335e-9■■■■■ 32.6
HDAC1-208ENST00000482310 GP5P40197 560 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 SLCO1A2P46721 670 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 RXRGP48443 463 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 CDKN2DP55273 166 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 ARHGAP8P85298 464 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 HSPA14Q0VDF9 509 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 HECTD2Q5U5R9 776 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 KIAA0408Q6ZU52 694 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 ZC3HC1Q86WB0 502 aaKnown RBP12.99□□□□□ -0.33
HDAC1-208ENST00000482310 LRRC6Q86X45 466 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 SLC25A45Q8N413 288 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 FSTL5Q8N475 847 aaPredicted RBP12.99□□□□□ -0.33
HDAC1-208ENST00000482310 OR2L2Q8NH16 312 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 HM13Q8TCT9 377 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 SAP25Q8TEE9 199 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 SETD7Q8WTS6 366 aaKnown RBP12.99□□□□□ -0.33
HDAC1-208ENST00000482310 PATE1Q8WXA2 126 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 GPR21Q99679 349 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 RBBP8Q99708 897 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 SLC30A3Q99726 388 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 TIMM29Q9BSF4 260 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 AARSD1Q9BTE6 412 aaKnown RBP12.99□□□□□ -0.33
HDAC1-208ENST00000482310 TSSK1BQ9BXA7 367 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 DPEP2Q9H4A9 486 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 COG4Q9H9E3 785 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 CAB39LQ9H9S4 337 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 SPATS2LQ9NUQ6 558 aaKnown RBP12.99□□□□□ -0.33
HDAC1-208ENST00000482310 TRNAU1APQ9NX07 287 aaKnown RBP12.99□□□□□ -0.33
HDAC1-208ENST00000482310 GULP1Q9UBP9 304 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 TBC1D29Q9UFV1 150 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 BTBD3Q9Y2F9 522 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 MTO1Q9Y2Z2 717 aaKnown RBP12.99□□□□□ -0.33
HDAC1-208ENST00000482310 CFAP20Q9Y6A4 193 aaKnown RBP12.99□□□□□ -0.33
HDAC1-208ENST00000482310 IKBKGQ9Y6K9 419 aa12.99□□□□□ -0.33
HDAC1-208ENST00000482310 RP1P56715 2156 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 UQCRHLA0A096LP55 91 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 F8W8V4 182 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 QSOX1O00391 747 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 YKT6O15498 198 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 DFNA5O60443 496 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 VPS26AO75436 327 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 TUBBP07437 444 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 UQCRHP07919 91 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 ABHD2P08910 425 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 CCR7P32248 378 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 MSH2P43246 934 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 CLCNKAP51800 687 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 NAB1Q13506 487 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 LRP8Q14114 963 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 MROH9Q5TGP6 573 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 DUS1LQ6P1R4 473 aaKnown RBP12.98□□□□□ -0.33
HDAC1-208ENST00000482310 ZNF449Q6P9G9 518 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 OTOAQ7RTW8 1153 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 GPBAR1Q8TDU6 330 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 EPS8L3Q8TE67 593 aaKnown RBP12.98□□□□□ -0.33
HDAC1-208ENST00000482310 ZDHHC1Q8WTX9 485 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 SKA2Q8WVK7 121 aaPredicted RBP12.98□□□□□ -0.33
HDAC1-208ENST00000482310 CAMK1GQ96NX5 476 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 PANX3Q96QZ0 392 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 OLFM1Q99784 485 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms