RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 FUT8Q9BYC5 575 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 ZCCHC2Q9C0B9 1178 aaKnown RBP11.43□□□□□ -0.58
HPS4-212ENST00000481910 OR2AG1Q9H205 316 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 ACSS3Q9H6R3 686 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 TCF7L2Q9NQB0 619 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 FBXO6Q9NRD1 293 aaPredicted RBP11.43□□□□□ -0.58
HPS4-212ENST00000481910 NSMCE4AQ9NXX6 385 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 TXNDC16Q9P2K2 825 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 ATXN10Q9UBB4 475 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 MOSPD1Q9UJG1 213 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 VPS9D1Q9Y2B5 631 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 CRYL1Q9Y2S2 319 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 CACNA1HO95180 2353 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 KNL1Q8NG31 2342 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 SPTY2D1-AS1A0A0U1RR47 76 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 UBA6A0AVT1 1052 aaPredicted RBP11.43□□□□□ -0.58
HPS4-212ENST00000481910 VILLO15195 856 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 VEGFDO43915 354 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 HAUS5O94927 633 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 AHSGP02765 367 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 ATP1B2P14415 290 aaPredicted RBP11.43□□□□□ -0.58
HPS4-212ENST00000481910 ZNF7P17097 686 aaPredicted RBP11.43□□□□□ -0.58
HPS4-212ENST00000481910 NSG1P42857 185 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 LEPRP48357 1165 aaKnown RBP11.43□□□□□ -0.58
HPS4-212ENST00000481910 POLD2P49005 469 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 CLCN2P51788 898 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 MPP1Q00013 466 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 B4GALNT1Q00973 533 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 EFTUD2Q15029 972 aaKnown RBP eCLIP11.43□□□□□ -0.58
HPS4-212ENST00000481910 ZNF789Q5FWF6 425 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 TPRG1LQ5T0D9 272 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 RNF187Q5TA31 235 aaPredicted RBP11.43□□□□□ -0.58
HPS4-212ENST00000481910 KIAA0408Q6ZU52 694 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 MARK2Q7KZI7 788 aaKnown RBP11.43□□□□□ -0.58
HPS4-212ENST00000481910 DET1Q7L5Y6 550 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 NANOGNBQ7Z5D8 188 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 STRA8Q7Z7C7 330 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 ADGRG6Q86SQ4 1221 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 SLC22A18ASQ8N1D0 253 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 MREGQ8N565 214 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 CLDN19Q8N6F1 224 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 OR56A4Q8NGH8 313 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 NAT14Q8WUY8 206 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 ANKRD49Q8WVL7 239 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 SCG3Q8WXD2 468 aaKnown RBP11.43□□□□□ -0.58
HPS4-212ENST00000481910 SGF29Q96ES7 293 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 WDR92Q96MX6 357 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 CCDC77Q9BR77 488 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 KCNH6Q9H252 994 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 INTS10Q9NVR2 710 aaKnown RBP11.43□□□□□ -0.58
HPS4-212ENST00000481910 VPS18Q9P253 973 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 TMCO1Q9UM00 188 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 PSAT1Q9Y617 370 aa11.43□□□□□ -0.58
HPS4-212ENST00000481910 IGLV3-16A0A075B6K0 115 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 EXOC1LA0A1B0GW35 172 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 OR2AG2A6NM03 316 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 CFIP05156 583 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 CEACAM5P06731 702 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 CCDC166P0CW27 439 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 HOXD12P35452 270 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 EIF3BP55884 814 aaKnown RBP11.42□□□□□ -0.58
HPS4-212ENST00000481910 GTF2H3Q13889 308 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 KLHL38Q2WGJ6 581 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 BEND6Q5SZJ8 279 aaPredicted RBP11.42□□□□□ -0.58
HPS4-212ENST00000481910 THEMIS2Q5TEJ8 643 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 RD3Q7Z3Z2 195 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 RABEPKQ7Z6M1 372 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 SLC26A11Q86WA9 606 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 DCLK2Q8N568 766 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 RASGEF1AQ8N9B8 481 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 CPNE1Q99829 537 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 CLPBQ9H078 707 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 MRPL40Q9NQ50 206 aaKnown RBP11.42□□□□□ -0.58
HPS4-212ENST00000481910 GPR27Q9NS67 375 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 SMG5Q9UPR3 1016 aaKnown RBP11.42□□□□□ -0.58
HPS4-212ENST00000481910 SLC17A4Q9Y2C5 497 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 PIKFYVEQ9Y2I7 2098 aa11.42□□□□□ -0.58
HPS4-212ENST00000481910 A0A1B0GVT2 93 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 POC1B-GALNT4F8VUJ3 575 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 PRMT5O14744 637 aaPredicted RBP11.41□□□□□ -0.58
HPS4-212ENST00000481910 NUAK1O60285 661 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 ZNF8P17098 575 aaPredicted RBP11.41□□□□□ -0.58
HPS4-212ENST00000481910 GABRB3P28472 473 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 FMO4P31512 558 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 DMPKQ09013 629 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 NAB1Q13506 487 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 FZD2Q14332 565 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 DUOXA1Q1HG43 343 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 PEAR1Q5VY43 1037 aaPredicted RBP11.41□□□□□ -0.58
HPS4-212ENST00000481910 NXNQ6DKJ4 435 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 LAIR1Q6GTX8 287 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 CNSTQ6PJW8 725 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 MACC1Q6ZN28 852 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 GALNT7Q86SF2 657 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 CEP76Q8TAP6 659 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 LPGAT1Q92604 370 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 TSACCQ96A04 125 aaPredicted RBP11.41□□□□□ -0.58
HPS4-212ENST00000481910 ARRDC1-AS1Q9H2J1 176 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 CYP4F12Q9HCS2 524 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 FGF22Q9HCT0 170 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms