RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 LSMEM2Q8N112 164 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 BBOF1Q8ND07 529 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 LRRC39Q96DD0 335 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 NXPE2Q96DL1 559 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 MFSD3Q96ES6 412 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 SLC38A3Q99624 504 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 CARD6Q9BX69 1037 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 SLC40A1Q9NP59 571 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.17■□□□□ 0.02
C9orf3-217ENST00000479161 CDC23Q9UJX2 597 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 VPS9D1Q9Y2B5 631 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 DNAJC16Q9Y2G8 782 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 PCDHGA8Q9Y5G5 932 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 ENTPD2Q9Y5L3 495 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 FREM2Q5SZK8 3169 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 ANKRD11Q6UB99 2663 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-217ENST00000479161 OR51F1A6NGY5 319 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 PDZK1P1A8MUH7 402 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 PRMT5O14744 637 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-217ENST00000479161 LIN7AO14910 233 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-217ENST00000479161 SNX2O60749 519 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 AVILO75366 819 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 TTC4O95801 387 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 VIPP01282 170 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 OR56A5P0C7T3 313 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 OGNP20774 298 aaKnown RBP15.16■□□□□ 0.02
C9orf3-217ENST00000479161 RPS3P23396 243 aaKnown RBP eCLIP15.16■□□□□ 0.02
C9orf3-217ENST00000479161 NDUFS1P28331 727 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 LSSP48449 732 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 PDX1P52945 283 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 NFE2L1Q14494 772 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 CLCA4Q14CN2 919 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 TYSND1Q2T9J0 566 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 ANKRD20A4Q4UJ75 823 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 RNF187Q5TA31 235 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-217ENST00000479161 HIBCHQ6NVY1 386 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-217ENST00000479161 ZNF449Q6P9G9 518 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 XKR5Q6UX68 686 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 TMEM26Q6ZUK4 368 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 SDCCAG8Q86SQ7 713 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-217ENST00000479161 OR4D9Q8NGE8 314 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 OR10G6Q8NH81 332 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 TRIM44Q96DX7 344 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-217ENST00000479161 TSSK1BQ9BXA7 367 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 B3GNT4Q9C0J1 378 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 RAB33BQ9H082 229 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 KCNK4Q9NYG8 393 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 SCHIP1Q9P0W5 487 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-217ENST00000479161 HEBP2Q9Y5Z4 205 aa15.16■□□□□ 0.02
C9orf3-217ENST00000479161 ZCWPW2A0A1B0GU75 182 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 FAM149AA5PLN7 773 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 HGSO14964 777 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-217ENST00000479161 TTI1O43156 1089 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 SEC31AO94979 1220 aaKnown RBP15.15■□□□□ 0.02
C9orf3-217ENST00000479161 VAPBO95292 243 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 PRSS56P0CW18 603 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 RPL10P27635 214 aaKnown RBP15.15■□□□□ 0.02
C9orf3-217ENST00000479161 ALDH4A1P30038 563 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 INHBCP55103 352 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 OR1D5P58170 312 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 CKAP4Q07065 602 aaKnown RBP15.15■□□□□ 0.02
C9orf3-217ENST00000479161 RPE65Q16518 533 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 PLA2G4EQ3MJ16 856 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 DNAJC21Q5F1R6 531 aaKnown RBP15.15■□□□□ 0.02
C9orf3-217ENST00000479161 IZUMO3Q5VZ72 239 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 TMEM71Q6P5X7 295 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 FAM83HQ6ZRV2 1179 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-217ENST00000479161 DET1Q7L5Y6 550 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 SLITRK4Q8IW52 837 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 TRIM48Q8IWZ4 208 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 PDIK1LQ8N165 341 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 CLDN19Q8N6F1 224 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 SNF8Q96H20 258 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 CNTNAP3BQ96NU0 1288 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 KRT12Q99456 494 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 CNTNAP3Q9BZ76 1288 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 STRADBQ9C0K7 418 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 COG4Q9H9E3 785 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 POLR1BQ9H9Y6 1135 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 EPHA6Q9UF33 1036 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 WDR37Q9Y2I8 494 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 FAM169AQ9Y6X4 670 aa15.15■□□□□ 0.02
C9orf3-217ENST00000479161 WDFY3Q8IZQ1 3526 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 DMXL2Q8TDJ6 3036 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 URB1O60287 2271 aaKnown RBP15.14■□□□□ 0.01
C9orf3-217ENST00000479161 CCDC187A0A096LP49 1063 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 CCDC78A2IDD5 438 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 H3BMM5 538 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 KPNA5O15131 536 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 TP73O15350 636 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 TOX3O15405 576 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-217ENST00000479161 DUX1O43812 170 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 POLBP06746 335 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 SLC35G4P0C7Q5 338 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 MTHFD1P11586 935 aaKnown RBP15.14■□□□□ 0.01
C9orf3-217ENST00000479161 LIMK2P53671 638 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 DRG2P55039 364 aaKnown RBP15.14■□□□□ 0.01
C9orf3-217ENST00000479161 FRG1Q14331 258 aaKnown RBP15.14■□□□□ 0.01
C9orf3-217ENST00000479161 WHAMMP3Q1A5X7 153 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 NEPROQ6NW34 567 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms