RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PAF1Q8N7H5 531 aa10.66□□□□□ -0.7
VPS52-217ENST00000478934 ARL14EPQ8N8R7 260 aaPredicted RBP10.66□□□□□ -0.7
VPS52-217ENST00000478934 SLC43A3Q8NBI5 491 aa10.66□□□□□ -0.7
VPS52-217ENST00000478934 FAM81AQ8TBF8 368 aa10.66□□□□□ -0.7
VPS52-217ENST00000478934 ZUFSPQ96AP4 578 aa10.66□□□□□ -0.7
VPS52-217ENST00000478934 MTFMTQ96DP5 389 aaKnown RBP10.66□□□□□ -0.7
VPS52-217ENST00000478934 MYRFLQ96LU7 910 aa10.66□□□□□ -0.7
VPS52-217ENST00000478934 RNF145Q96MT1 663 aa10.66□□□□□ -0.7
VPS52-217ENST00000478934 HAUS8Q9BT25 410 aa10.66□□□□□ -0.7
VPS52-217ENST00000478934 KLF16Q9BXK1 252 aaPredicted RBP10.66□□□□□ -0.7
VPS52-217ENST00000478934 ADGRE3Q9BY15 652 aa10.66□□□□□ -0.7
VPS52-217ENST00000478934 P2RY12Q9H244 342 aa10.66□□□□□ -0.7
VPS52-217ENST00000478934 GID8Q9NWU2 228 aa10.66□□□□□ -0.7
VPS52-217ENST00000478934 TRPM5Q9NZQ8 1165 aa10.66□□□□□ -0.7
VPS52-217ENST00000478934 PHF24Q9UPV7 400 aa10.66□□□□□ -0.7
VPS52-217ENST00000478934 ZNF711Q9Y462 761 aa10.66□□□□□ -0.7
VPS52-217ENST00000478934 POLR3HQ9Y535 204 aaPredicted RBP10.66□□□□□ -0.7
VPS52-217ENST00000478934 STX16O14662 325 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 TAPBPO15533 448 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 MBL2P11226 248 aaPredicted RBP10.65□□□□□ -0.7
VPS52-217ENST00000478934 HOXB8P17481 243 aaPredicted RBP10.65□□□□□ -0.7
VPS52-217ENST00000478934 ALDH3B2P48448 385 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 ALDH7A1P49419 539 aaKnown RBP10.65□□□□□ -0.7
VPS52-217ENST00000478934 CCT8P50990 548 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 CLCN2P51788 898 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 IST1P53990 364 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 HMGCS1Q01581 520 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 PMS2P3Q13401 168 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 INPP5AQ14642 412 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 NEDD8Q15843 81 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 LRRC73Q5JTD7 316 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 ANKRD34AQ69YU3 496 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 SLC8B1Q6J4K2 584 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 DNAJC14Q6Y2X3 702 aaPredicted RBP10.65□□□□□ -0.7
VPS52-217ENST00000478934 RFLNAQ6ZTI6 216 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 FAM86B1Q8N7N1 296 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 CLHC1Q8NHS4 586 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 SNRNP27Q8WVK2 155 aaKnown RBP10.65□□□□□ -0.7
VPS52-217ENST00000478934 BIRC7Q96CA5 298 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 MBD1Q9UIS9 605 aaPredicted RBP10.65□□□□□ -0.7
VPS52-217ENST00000478934 UTS2RQ9UKP6 389 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 ARIH1Q9Y4X5 557 aaPredicted RBP10.65□□□□□ -0.7
VPS52-217ENST00000478934 PIKFYVEQ9Y2I7 2098 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 UNC80Q8N2C7 3258 aa10.65□□□□□ -0.7
VPS52-217ENST00000478934 A0A0J9YVX5 310 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 EEDO75530 441 aaKnown RBP10.65□□□□□ -0.71
VPS52-217ENST00000478934 PRAMEF1O95521 474 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 B3GALT4O96024 378 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 TFPTP0C1Z6 253 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 VARSP26640 1264 aaKnown RBP10.65□□□□□ -0.71
VPS52-217ENST00000478934 ERVK-8P63133 956 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 NR6A1Q15406 480 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 ANKDD1AQ495B1 522 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 TMEM259Q4ZIN3 620 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 ATP6AP1LQ52LC2 224 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 GPR107Q5VW38 600 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 OGFOD2Q6N063 350 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 FRA10AC1Q70Z53 315 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 SPATA19Q7Z5L4 167 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 TSPAN33Q86UF1 283 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 ZSWIM9Q86XI8 627 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 ADGRG2Q8IZP9 1017 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 ADAMTS19Q8TE59 1207 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 SGCDQ92629 289 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 KCNJ9Q92806 393 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 IPPKQ9H8X2 491 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 ZNF334Q9HCZ1 680 aaPredicted RBP10.65□□□□□ -0.71
VPS52-217ENST00000478934 IRAK4Q9NWZ3 460 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 MTRRQ9UBK8 725 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 ZNHIT2Q9UHR6 403 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 TDRKHQ9Y2W6 561 aaKnown RBP10.65□□□□□ -0.71
VPS52-217ENST00000478934 SLC30A1Q9Y6M5 507 aa10.65□□□□□ -0.71
VPS52-217ENST00000478934 AQP12BA6NM10 295 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 GIPC1O14908 333 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 CLOCKO15516 846 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 MLYCDO95822 493 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 CHEK2O96017 543 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 ELK4P28324 431 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 ENTPD1P49961 510 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 EMP3P54852 163 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 GTF2H2Q13888 395 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 AP5B1Q2VPB7 878 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 PTRHD1Q6GMV3 140 aaKnown RBP10.64□□□□□ -0.71
VPS52-217ENST00000478934 GTF2H2CQ6P1K8 395 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 DLEU7Q6UYE1 221 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 AQP12AQ8IXF9 295 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 TRPV3Q8NET8 790 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 C12orf43Q96C57 262 aaKnown RBP10.64□□□□□ -0.71
VPS52-217ENST00000478934 ISOC1Q96CN7 298 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 C1QTNF3Q9BXJ4 246 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 BRINP2Q9C0B6 783 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 ASB8Q9H765 288 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 ELAC1Q9H777 363 aaKnown RBP10.64□□□□□ -0.71
VPS52-217ENST00000478934 CARS2Q9HA77 564 aaKnown RBP10.64□□□□□ -0.71
VPS52-217ENST00000478934 ZFP14Q9HCL3 533 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 MRGBPQ9NV56 204 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 THEGQ9P2T0 379 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 PKP3Q9Y446 797 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 YIPF1Q9Y548 306 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 SCN5AQ14524 2016 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms