RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 OGFOD3Q6PK18 319 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 DHRS13Q6UX07 377 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 CERS6Q6ZMG9 384 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 TMPRSS7Q7RTY8 843 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 TAF8Q7Z7C8 310 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 ADGRG6Q86SQ4 1221 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 SDCCAG8Q86SQ7 713 aaPredicted RBP9.66□□□□□ -0.86
NIFK-205ENST00000477693 TMPRSS12Q86WS5 348 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 GALNT13Q8IUC8 556 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 CNTN4Q8IWV2 1026 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 AGGF1Q8N302 714 aaeCLIP9.66□□□□□ -0.86
NIFK-205ENST00000477693 GPR156Q8NFN8 814 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 OR4K2Q8NGD2 314 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 OR6C4Q8NGE1 309 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 GPR150Q8NGU9 434 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 FBF1Q8TES7 1133 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 NAT6Q93015 286 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 ZNF669Q96BR6 464 aaPredicted RBP9.66□□□□□ -0.86
NIFK-205ENST00000477693 CERS2Q96G23 380 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 CFAP36Q96G28 342 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 ZIM3Q96PE6 472 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 CPNE1Q99829 537 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 SH3GL2Q99962 352 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 TRIM39Q9HCM9 518 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 NLE1Q9NVX2 485 aaPredicted RBP9.66□□□□□ -0.86
NIFK-205ENST00000477693 SMOXQ9NWM0 555 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 ZFATQ9P243 1243 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 ATXN10Q9UBB4 475 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 KLK13Q9UKR3 277 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 TMPRSS11EQ9UL52 423 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 CORO1CQ9ULV4 474 aaPredicted RBP9.66□□□□□ -0.86
NIFK-205ENST00000477693 GPR34Q9UPC5 381 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 ST14Q9Y5Y6 855 aa9.66□□□□□ -0.86
NIFK-205ENST00000477693 ARID1BQ8NFD5 2236 aaPredicted RBP9.66□□□□□ -0.86
NIFK-205ENST00000477693 IQANK1A0A1B0GTG1 560 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 AGAP14A8MT82 685 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 HMGB1P1B2RPK0 211 aaPredicted RBP9.65□□□□□ -0.86
NIFK-205ENST00000477693 GOLGA8KD6RF30 607 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 F8W8V4 182 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 CHUKO15111 745 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 BUD23O43709 281 aaKnown RBP9.65□□□□□ -0.86
NIFK-205ENST00000477693 VEGFDO43915 354 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 NOBOXO60393 691 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 FAM155BO75949 473 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 ASMTLO95671 621 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 MYF5P13349 255 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 ZNF8P17098 575 aaPredicted RBP9.65□□□□□ -0.86
NIFK-205ENST00000477693 SPINK2P20155 84 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 AK4P27144 223 aaPredicted RBP9.65□□□□□ -0.86
NIFK-205ENST00000477693 ARCN1P48444 511 aaKnown RBP9.65□□□□□ -0.86
NIFK-205ENST00000477693 CSE1LP55060 971 aaKnown RBP9.65□□□□□ -0.86
NIFK-205ENST00000477693 ZNF844Q08AG5 666 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 NFATC2Q13469 925 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 SEPT6Q14141 434 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 CHRNA6Q15825 494 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 CCDC157Q569K6 752 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 CEP85LQ5SZL2 805 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 RNF187Q5TA31 235 aaPredicted RBP9.65□□□□□ -0.86
NIFK-205ENST00000477693 GRTP1Q5TC63 336 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 NEPROQ6NW34 567 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 FAM151BQ6UXP7 276 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 MARK2Q7KZI7 788 aaKnown RBP9.65□□□□□ -0.86
NIFK-205ENST00000477693 CCDC91Q7Z6B0 441 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 C17orf82Q86X59 251 aaPredicted RBP9.65□□□□□ -0.86
NIFK-205ENST00000477693 CACTIN-AS1Q8N1I8 211 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 KYQ8NBH2 561 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 FAM46DQ8NEK8 389 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 DDHD1Q8NEL9 900 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 OR13C4Q8NGS5 318 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 IFI44Q8TCB0 444 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 SLC44A1Q8WWI5 657 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.65□□□□□ -0.86
NIFK-205ENST00000477693 MFSD3Q96ES6 412 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 CDKN2AIPNLQ96HQ2 116 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 WDR83Q9BRX9 315 aaKnown RBP9.65□□□□□ -0.86
NIFK-205ENST00000477693 DHRS4Q9BTZ2 278 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 OR2AG1Q9H205 316 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 DPEP2Q9H4A9 486 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 SUDS3Q9H7L9 328 aaPredicted RBP9.65□□□□□ -0.86
NIFK-205ENST00000477693 PPANQ9NQ55 473 aaKnown RBP9.65□□□□□ -0.86
NIFK-205ENST00000477693 C20orf96Q9NUD7 363 aaPredicted RBP9.65□□□□□ -0.86
NIFK-205ENST00000477693 TAAR2Q9P1P5 351 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 PSMC3IPQ9P2W1 217 aaPredicted RBP9.65□□□□□ -0.86
NIFK-205ENST00000477693 LGALS13Q9UHV8 139 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 PADI4Q9UM07 663 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 MSRB2Q9Y3D2 182 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 GPSM3Q9Y4H4 160 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 PCYT1BQ9Y5K3 369 aaPredicted RBP9.65□□□□□ -0.86
NIFK-205ENST00000477693 ACTL7BQ9Y614 415 aa9.65□□□□□ -0.86
NIFK-205ENST00000477693 TDRD6O60522 2096 aaKnown RBP9.65□□□□□ -0.87
NIFK-205ENST00000477693 ZNF106Q9H2Y7 1883 aaKnown RBP9.64□□□□□ -0.87
NIFK-205ENST00000477693 RGS16O15492 202 aaPredicted RBP9.64□□□□□ -0.87
NIFK-205ENST00000477693 GPR39O43194 453 aa9.64□□□□□ -0.87
NIFK-205ENST00000477693 GRID2O43424 1007 aa9.64□□□□□ -0.87
NIFK-205ENST00000477693 NUDT21O43809 227 aaKnown RBP9.64□□□□□ -0.87
NIFK-205ENST00000477693 MTX2O75431 263 aa9.64□□□□□ -0.87
NIFK-205ENST00000477693 SRP72O76094 671 aaKnown RBP9.64□□□□□ -0.87
NIFK-205ENST00000477693 VAPBO95292 243 aa9.64□□□□□ -0.87
NIFK-205ENST00000477693 PRAMEF1O95521 474 aa9.64□□□□□ -0.87
NIFK-205ENST00000477693 PNLIPP16233 465 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms