RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 OR52N1Q8NH53 320 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 PELOQ9BRX2 385 aaKnown RBP12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 ASPSCR1Q9BZE9 553 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 SMPD3Q9NY59 655 aaPredicted RBP12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 ZNF224Q9NZL3 707 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 KLHL21Q9UJP4 597 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 BTBD3Q9Y2F9 522 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 PQLC2LA1A4F0 135 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 PRR23AA6NEV1 266 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 ZNF195O14628 629 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 ZBTB14O43829 449 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 CILPO75339 1184 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 TRIM3O75382 744 aaPredicted RBP12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 OR2B3O76000 313 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 NPPAP01160 153 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 CRHR1P34998 444 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 SLC1A6P48664 564 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 MEOX2P50222 304 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 MRPS5P82675 430 aaKnown RBP12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 ATP6AP1Q15904 470 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 AANATQ16613 207 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 C2CD6Q53TS8 623 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 MAVSQ7Z434 540 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 SPRED1Q7Z699 444 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 RHOT1Q8IXI2 618 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 SYTL1Q8IYJ3 562 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 ST8SIA2Q92186 375 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 RPL3LQ92901 407 aaKnown RBP12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 TMEM176AQ96HP8 235 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 FBXL20Q96IG2 436 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 SERPINB11Q96P15 392 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 BRD7Q9NPI1 651 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 COA4Q9NYJ1 87 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 MKLN1Q9UL63 735 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 USP22Q9UPT9 525 aa12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 PIN4Q9Y237 131 aaKnown RBP12.51□□□□□ -0.41
RTFDC1-207ENST00000477573 RALGAPA2Q2PPJ7 1873 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 A0A1B0GWJ7 208 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 CLN5O75503 358 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 C1QBP02746 253 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 SOX11P35716 441 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 CDH8P55286 799 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 PTPN11Q06124 597 aaPredicted RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 EFR3AQ14156 821 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 IQCCQ4KMZ1 466 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 CYBRD1Q53TN4 286 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 ZMAT1Q5H9K5 638 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 KCNT2Q6UVM3 1135 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 CHST15Q7LFX5 561 aaPredicted RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 SMG8Q8ND04 991 aaKnown RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 TFAP2BQ92481 460 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 C18orf25Q96B23 403 aaPredicted RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 TMCO6Q96DC7 493 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 BCL2L14Q9BZR8 327 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 UPF3AQ9H1J1 476 aaKnown RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 CDHR5Q9HBB8 845 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 PIH1D1Q9NWS0 290 aaKnown RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 RPH3AQ9Y2J0 694 aaPredicted RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 PCDHGA7Q9Y5G6 932 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 TNPO3Q9Y5L0 923 aaKnown RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 A0A1B0GVM2 712 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 EFCAB10A6NFE3 127 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 H0Y626 953 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 M0QZ92 97 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 VAPBO95292 243 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 RPLP2P05387 115 aaKnown RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 CDK1P06493 297 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 POU3F3P20264 500 aaPredicted RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 TGM2P21980 687 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 HOXC8P31273 242 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 STARP49675 285 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 ARSEP51690 589 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 ART3Q13508 389 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 TAB1Q15750 504 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 SGCAQ16586 387 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 ADPRMQ3LIE5 342 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 NXNL2Q5VZ03 156 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 MBLAC2Q68D91 279 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 TFAP2EQ6VUC0 442 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 SLC26A11Q86WA9 606 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 LRRC52Q8N7C0 313 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 GLB1L3Q8NCI6 653 aaPredicted RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 OR5T2Q8NGG2 359 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 MCFD2Q8NI22 146 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 ZSCAN18Q8TBC5 510 aaPredicted RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 STON2Q8WXE9 905 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 RAD51AP1Q96B01 352 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 BIRC7Q96CA5 298 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 PAWRQ96IZ0 340 aaKnown RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 CNPY3Q9BT09 278 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 SAV1Q9H4B6 383 aaPredicted RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 LDAHQ9H6V9 325 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 CATSPERBQ9H7T0 1116 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 RANGRFQ9HD47 186 aaPredicted RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 OSGIN1Q9UJX0 560 aa12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 DRG1Q9Y295 367 aaKnown RBP12.5□□□□□ -0.41
RTFDC1-207ENST00000477573 TRIP12Q14669 1992 aaPredicted RBP12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 RNF103-CHMP3A0A140T963 221 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 PNMA8CA0A1B0GUJ8 204 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 TMEM191CA6NGB0 347 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms