RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 SLC4A11Q8NBS3 891 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 TMEM35BQ8NCS4 154 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 MSANTD4Q8NCY6 345 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 KIF18AQ8NI77 898 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 ZNF606Q8WXB4 792 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 RSPH1Q8WYR4 309 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 ZNF653Q96CK0 615 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 SENP8Q96LD8 212 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 TWNKQ96RR1 684 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 TRMOQ9BU70 441 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 GATA5Q9BWX5 397 aaPredicted RBP5.35□□□□□ -1.55
SSR3-206ENST00000476217 TM2D2Q9BX73 214 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 ELOVL4Q9GZR5 314 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 THAP2Q9H0W7 228 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 SYNCQ9H7C4 482 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 PAPOLBQ9NRJ5 636 aaKnown RBP5.35□□□□□ -1.55
SSR3-206ENST00000476217 FAM49BQ9NUQ9 324 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 TBC1D13Q9NVG8 400 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 TMLHEQ9NVH6 421 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 TAS2R14Q9NYV8 317 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 PRG3Q9Y2Y8 225 aaPredicted RBP5.35□□□□□ -1.55
SSR3-206ENST00000476217 SCN1AP35498 2009 aa5.35□□□□□ -1.55
SSR3-206ENST00000476217 CTAGE9A4FU28 777 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 AQP12BA6NM10 295 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 I3L4J1 428 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 M0QZQ0 153 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 O00370 1275 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 PRPF4O43172 522 aaKnown RBP eCLIP5.34□□□□□ -1.55
SSR3-206ENST00000476217 TRAPPC3O43617 180 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 TADA2AO75478 443 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 BAIAP3O94812 1187 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 DDHD2O94830 711 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 MOCS3O95396 460 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 CSTBP04080 98 aaKnown RBP5.34□□□□□ -1.55
SSR3-206ENST00000476217 MYBL1P10243 752 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 GZMAP12544 262 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 WARSP23381 471 aaKnown RBP5.34□□□□□ -1.55
SSR3-206ENST00000476217 ACAT1P24752 427 aaKnown RBP5.34□□□□□ -1.55
SSR3-206ENST00000476217 ADORA2BP29275 332 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 GRK5P34947 590 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 IDUAP35475 653 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 GNL1P36915 607 aaPredicted RBP5.34□□□□□ -1.55
SSR3-206ENST00000476217 BRCC3P46736 316 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 CPA2P48052 419 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 LHX1P48742 406 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 YPEL5P62699 121 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 AP2B1P63010 937 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 DSC1Q08554 894 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 PPIGQ13427 754 aaKnown RBP eCLIP5.34□□□□□ -1.55
SSR3-206ENST00000476217 GAB1Q13480 694 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 BIRC2Q13490 618 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 KLF9Q13886 244 aaPredicted RBP5.34□□□□□ -1.55
SSR3-206ENST00000476217 SPOUT1Q5T280 376 aaKnown RBP5.34□□□□□ -1.55
SSR3-206ENST00000476217 PAPD7Q5XG87 772 aaKnown RBP5.34□□□□□ -1.55
SSR3-206ENST00000476217 DENND1BQ6P3S1 775 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 DCLRE1AQ6PJP8 1040 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.34□□□□□ -1.558e-7■□□□□ 9.3
SSR3-206ENST00000476217 MMS22LQ6ZRQ5 1243 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 TFAP2DQ7Z6R9 452 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 CCDC117Q8IWD4 279 aaPredicted RBP5.34□□□□□ -1.55
SSR3-206ENST00000476217 TMEM86AQ8N2M4 240 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 SLC35F6Q8N357 371 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 C1orf131Q8NDD1 294 aaKnown RBP5.34□□□□□ -1.55
SSR3-206ENST00000476217 TRIM58Q8NG06 486 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 OLIG1Q8TAK6 271 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 STYXQ8WUJ0 223 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 RFFLQ8WZ73 363 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 CPT1BQ92523 772 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 HMCESQ96FZ2 354 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 ZFYVE19Q96K21 471 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 ZNF778Q96MU6 729 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 CASD1Q96PB1 797 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 PCDHB18PQ96TA0 734 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 C11orf70Q9BRQ4 267 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 MED10Q9BTT4 135 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 HTATIP2Q9BUP3 242 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 ISCUQ9H1K1 167 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 DPEP3Q9H4B8 488 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 DDX43Q9NXZ2 648 aaKnown RBP5.34□□□□□ -1.55
SSR3-206ENST00000476217 DNAJB4Q9UDY4 337 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 TAGLN3Q9UI15 199 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 TSPAN16Q9UKR8 245 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 KIAA1257Q9ULG3 409 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 NENFQ9UMX5 172 aa5.34□□□□□ -1.55
SSR3-206ENST00000476217 C19orf53Q9UNZ5 99 aaPredicted RBP5.34□□□□□ -1.55
SSR3-206ENST00000476217 ALPK3Q96L96 1907 aa5.33□□□□□ -1.56
SSR3-206ENST00000476217 SF3B1O75533 1304 aaKnown RBP eCLIP5.33□□□□□ -1.56
SSR3-206ENST00000476217 TBC1D3DA0A087WVF3 549 aa5.33□□□□□ -1.56
SSR3-206ENST00000476217 TBC1D3IA0A087WXS9 549 aa5.33□□□□□ -1.56
SSR3-206ENST00000476217 TBC1D3EA0A087X179 549 aa5.33□□□□□ -1.56
SSR3-206ENST00000476217 TBC1D3KA0A087X1G2 549 aa5.33□□□□□ -1.56
SSR3-206ENST00000476217 TBC1D3BA6NDS4 549 aa5.33□□□□□ -1.56
SSR3-206ENST00000476217 TBC1D3FA6NER0 549 aaPredicted RBP5.33□□□□□ -1.56
SSR3-206ENST00000476217 C2CD4BA6NLJ0 364 aa5.33□□□□□ -1.56
SSR3-206ENST00000476217 C16orf96A6NNT2 1141 aa5.33□□□□□ -1.56
SSR3-206ENST00000476217 TMEM110-MUSTN1A8MSY1 372 aa5.33□□□□□ -1.56
SSR3-206ENST00000476217 BTNL10A8MVZ5 291 aa5.33□□□□□ -1.56
SSR3-206ENST00000476217 TBC1D3LB9A6J9 549 aa5.33□□□□□ -1.56
SSR3-206ENST00000476217 TMEM189-UBE2V1I3L0A0 370 aa5.33□□□□□ -1.56
SSR3-206ENST00000476217 SOCS2O14508 198 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms