RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TMEM135Q86UB9 458 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 ZNF761Q86XN6 746 aaPredicted RBP12.88□□□□□ -0.35
TPM3-216ENST00000473036 UNC5BQ8IZJ1 945 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 SFRP1Q8N474 314 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 OR6P1Q8NGX9 317 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 UBXN4Q92575 508 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 PEX13Q92968 403 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 ULK4Q96C45 1275 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 LINC00615Q96LM1 132 aaPredicted RBP12.88□□□□□ -0.35
TPM3-216ENST00000473036 COPS8Q99627 209 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 TRIM31Q9BZY9 425 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 PRORYQ9H606 182 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 XAB2Q9HCS7 855 aaKnown RBP12.88□□□□□ -0.35
TPM3-216ENST00000473036 LRIT1Q9P2V4 623 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 SNX24Q9Y343 169 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 TEX51A0A1B0GUA7 166 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 A0A1W2PNU3 283 aaPredicted RBP12.87□□□□□ -0.35
TPM3-216ENST00000473036 SDR42E2A6NKP2 422 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 NTN3O00634 580 aaPredicted RBP12.87□□□□□ -0.35
TPM3-216ENST00000473036 GLB1P16278 677 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 PBLDP30039 288 aaPredicted RBP12.87□□□□□ -0.35
TPM3-216ENST00000473036 SLC19A1P41440 591 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 PRLHRP49683 370 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 ITGA8P53708 1063 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 OR1D5P58170 312 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 UBE2IP63279 158 aaKnown RBP12.87□□□□□ -0.35
TPM3-216ENST00000473036 CCL7P80098 99 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 CAV1Q03135 178 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 CFHR1Q03591 330 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 GTF2H3Q13889 308 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 NR1D2Q14995 579 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 RTP5Q14D33 572 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 ANKRD20A4Q4UJ75 823 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 AFTPHQ6ULP2 937 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 HOOK3Q86VS8 718 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 AMZ2Q86W34 360 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 Q8N9G6 341 aaPredicted RBP12.87□□□□□ -0.35
TPM3-216ENST00000473036 SNIP1Q8TAD8 396 aaKnown RBP12.87□□□□□ -0.35
TPM3-216ENST00000473036 LKAAEAR1Q8TD35 194 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.87□□□□□ -0.35
TPM3-216ENST00000473036 GLMNQ92990 594 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 TSPYL1Q9H0U9 437 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 OSGEPL1Q9H4B0 414 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 RRAGDQ9NQL2 400 aaPredicted RBP12.87□□□□□ -0.35
TPM3-216ENST00000473036 GRHL1Q9NZI5 618 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 NCKIPSDQ9NZQ3 722 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 ZNF462Q96JM2 2506 aa12.87□□□□□ -0.35
TPM3-216ENST00000473036 TENM4Q6N022 2769 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 FAM237BA0A1B0GVD1 139 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 OR52A4PA6NMU1 304 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 CD3EAPO15446 510 aaKnown RBP12.86□□□□□ -0.35
TPM3-216ENST00000473036 NUDT21O43809 227 aaKnown RBP12.86□□□□□ -0.35
TPM3-216ENST00000473036 VAPBO95292 243 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 F3P13726 295 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 JUPP14923 745 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 FASLGP48023 281 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 RPIAP49247 311 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 DUSP3P51452 185 aaPredicted RBP12.86□□□□□ -0.35
TPM3-216ENST00000473036 PRAMEP78395 509 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 SARNPP82979 210 aaKnown RBP12.86□□□□□ -0.35
TPM3-216ENST00000473036 LAMB3Q13751 1172 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 MORF4L2Q15014 288 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 ZNF789Q5FWF6 425 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 HP1BP3Q5SSJ5 553 aaPredicted RBP12.86□□□□□ -0.35
TPM3-216ENST00000473036 METRNLQ641Q3 311 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 DUPD1Q68J44 220 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 KIAA0930Q6ICG6 404 aaPredicted RBP12.86□□□□□ -0.35
TPM3-216ENST00000473036 ABRAXAS1Q6UWZ7 409 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 PACS1Q6VY07 963 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 NAPRTQ6XQN6 538 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 CEP128Q6ZU80 1094 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 SPRED1Q7Z699 444 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 IFT20Q8IY31 132 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 DCBLD1Q8N8Z6 715 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 SPDYE1Q8NFV5 336 aaPredicted RBP12.86□□□□□ -0.35
TPM3-216ENST00000473036 GPR150Q8NGU9 434 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 OR2L2Q8NH16 312 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 MAPK15Q8TD08 544 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 TTC25Q96NG3 672 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 ERP44Q9BS26 406 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 ZCCHC2Q9C0B9 1178 aaKnown RBP12.86□□□□□ -0.35
TPM3-216ENST00000473036 CATSPERZQ9NTU4 200 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 FAM8A1Q9UBU6 413 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 ATXN7L1Q9ULK2 861 aaPredicted RBP12.86□□□□□ -0.35
TPM3-216ENST00000473036 PCDHB1Q9Y5F3 818 aa12.86□□□□□ -0.35
TPM3-216ENST00000473036 DNMT3AQ9Y6K1 912 aaPredicted RBP12.86□□□□□ -0.35
TPM3-216ENST00000473036 PMS2P1A4D2B8 440 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 MGAT4DA6NG13 374 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 IQCF5A8MTL0 148 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 BHMG1C9JSJ3 638 aaPredicted RBP12.85□□□□□ -0.35
TPM3-216ENST00000473036 MT-CO3P00414 261 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 PNLIPP16233 465 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 PDHA2P29803 388 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 E2F1Q01094 437 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 CALCOCO2Q13137 446 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 TARDBPQ13148 414 aaKnown RBP eCLIP12.85□□□□□ -0.35
TPM3-216ENST00000473036 ITIH4Q14624 930 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 FASTKD3Q14CZ7 662 aaKnown RBP12.85□□□□□ -0.35
TPM3-216ENST00000473036 FASTKD1Q53R41 847 aaKnown RBP12.85□□□□□ -0.35
TPM3-216ENST00000473036 AGAP9Q5VTM2 703 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms