RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 WHRNQ9P202 907 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 MARCH4Q9P2E8 410 aaPredicted RBP14.99□□□□□ -0.01
SDC3-203ENST00000471567 ZNF624Q9P2J8 865 aaPredicted RBP14.99□□□□□ -0.01
SDC3-203ENST00000471567 WDR37Q9Y2I8 494 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 SNX24Q9Y343 169 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 PRSS21Q9Y6M0 314 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 FAM169AQ9Y6X4 670 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 FAM149AA5PLN7 773 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 TMX2-CTNND1H3BSU7 103 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 PRMT5O14744 637 aaPredicted RBP14.98□□□□□ -0.01
SDC3-203ENST00000471567 TP73O15350 636 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 OR1I1O60431 355 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 NDUFS3O75489 264 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 TTC4O95801 387 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 VIPP01282 170 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 PGAM1P18669 254 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 OGNP20774 298 aaKnown RBP14.98□□□□□ -0.01
SDC3-203ENST00000471567 RPS3P23396 243 aaKnown RBP eCLIP14.98□□□□□ -0.01
SDC3-203ENST00000471567 ALDH4A1P30038 563 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 EPHA4P54764 986 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 ARL4CP56559 192 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 OR1D5P58170 312 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 GPLD1P80108 840 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 DHX9Q08211 1270 aaKnown RBP14.98□□□□□ -0.01
SDC3-203ENST00000471567 RPA4Q13156 261 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 CBLBQ13191 982 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 CAMK2BQ13554 666 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 CLCA4Q14CN2 919 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 ISXQ2M1V0 245 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 TYSND1Q2T9J0 566 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 ZNF658BQ4V348 819 aaPredicted RBP14.98□□□□□ -0.01
SDC3-203ENST00000471567 RNF187Q5TA31 235 aaPredicted RBP14.98□□□□□ -0.01
SDC3-203ENST00000471567 NEPROQ6NW34 567 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 XKR5Q6UX68 686 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 LRRC6Q86X45 466 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 TRIM48Q8IWZ4 208 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 LMNTD2Q8IXW0 634 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 MNS1Q8NEH6 495 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 CXorf40BQ96DE9 158 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 EBNA1BP2Q99848 306 aaKnown RBP14.98□□□□□ -0.01
SDC3-203ENST00000471567 DPYSL5Q9BPU6 564 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 TSSK1BQ9BXA7 367 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 RAB17Q9H0T7 212 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 EPB41L1Q9H4G0 881 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 SYNDIG1Q9H7V2 258 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 COG4Q9H9E3 785 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 KCNK4Q9NYG8 393 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 UTP11Q9Y3A2 253 aaKnown RBP14.98□□□□□ -0.01
SDC3-203ENST00000471567 MRFAP1Q9Y605 127 aa14.98□□□□□ -0.01
SDC3-203ENST00000471567 BPTFQ12830 3046 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 IGHV1OR21-1A0A087WYE8 117 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 LILRA5A6NI73 299 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 D6RAR5 112 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 LIN7AO14910 233 aaPredicted RBP14.97□□□□□ -0.01
SDC3-203ENST00000471567 CSO75390 466 aaKnown RBP14.97□□□□□ -0.01
SDC3-203ENST00000471567 CPNE6O95741 557 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 SLC35G4P0C7Q5 338 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 CD1CP29017 333 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 PLOD1Q02809 727 aaPredicted RBP14.97□□□□□ -0.01
SDC3-203ENST00000471567 CALCOCO2Q13137 446 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 THOC5Q13769 683 aaKnown RBP14.97□□□□□ -0.01
SDC3-203ENST00000471567 RPE65Q16518 533 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 HIF1AQ16665 826 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 LONRF1Q17RB8 773 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 BBS9Q3SYG4 887 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 MSS51Q4VC12 460 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 DUPD1Q68J44 220 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 CAPRIN2Q6IMN6 1127 aaKnown RBP14.97□□□□□ -0.01
SDC3-203ENST00000471567 TMEM26Q6ZUK4 368 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 LDB1Q86U70 411 aaPredicted RBP14.97□□□□□ -0.01
SDC3-203ENST00000471567 OTUD6BQ8N6M0 293 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.97□□□□□ -0.01
SDC3-203ENST00000471567 OR10G6Q8NH81 332 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 ZFPM2Q8WW38 1151 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 TMEM74Q96NL1 305 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 TRIM56Q9BRZ2 755 aaKnown RBP14.97□□□□□ -0.01
SDC3-203ENST00000471567 CARD6Q9BX69 1037 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 WWP1Q9H0M0 922 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 SLC40A1Q9NP59 571 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 PSMD13Q9UNM6 376 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 VPS9D1Q9Y2B5 631 aa14.97□□□□□ -0.01
SDC3-203ENST00000471567 UNC13CQ8NB66 2214 aa14.96□□□□□ -0.01
SDC3-203ENST00000471567 OR52A4PA6NMU1 304 aa14.96□□□□□ -0.01
SDC3-203ENST00000471567 CD151P48509 253 aa14.96□□□□□ -0.01
SDC3-203ENST00000471567 ADARP55265 1226 aaKnown RBP14.96□□□□□ -0.01
SDC3-203ENST00000471567 MRPS25P82663 173 aaKnown RBP14.96□□□□□ -0.01
SDC3-203ENST00000471567 AMZ1Q400G9 498 aa14.96□□□□□ -0.01
SDC3-203ENST00000471567 SPANXN3Q5MJ09 141 aa14.96□□□□□ -0.01
SDC3-203ENST00000471567 PIM3Q86V86 326 aa14.96□□□□□ -0.01
SDC3-203ENST00000471567 MARCH9Q86YJ5 346 aa14.96□□□□□ -0.01
SDC3-203ENST00000471567 CILP2Q8IUL8 1156 aa14.96□□□□□ -0.01
SDC3-203ENST00000471567 LILRA3Q8N6C8 439 aaPredicted RBP14.96□□□□□ -0.01
SDC3-203ENST00000471567 GABPB2Q8TAK5 448 aaPredicted RBP14.96□□□□□ -0.01
SDC3-203ENST00000471567 CALML6Q8TD86 181 aa14.96□□□□□ -0.01
SDC3-203ENST00000471567 GATA6Q92908 595 aa14.96□□□□□ -0.01
SDC3-203ENST00000471567 INSM2Q96T92 566 aaPredicted RBP14.96□□□□□ -0.01
SDC3-203ENST00000471567 TMEM121BQ9BXQ6 578 aaPredicted RBP14.96□□□□□ -0.01
SDC3-203ENST00000471567 NRSN2Q9GZP1 204 aa14.96□□□□□ -0.01
SDC3-203ENST00000471567 P2RY12Q9H244 342 aa14.96□□□□□ -0.01
SDC3-203ENST00000471567 C20orf96Q9NUD7 363 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms