RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 KLHDC8BQ8IXV7 354 aa9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 ZSCAN1Q8NBB4 408 aa9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 SLC38A9Q8NBW4 561 aa9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 CCDC112Q8NEF3 446 aa9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 STARD8Q92502 1023 aa9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 CXorf40BQ96DE9 158 aa9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 SLC41A2Q96JW4 573 aa9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 RMDN2Q96LZ7 410 aa9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 TEFMQ96QE5 360 aaKnown RBP9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 OSBPL8Q9BZF1 889 aa9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 TRIM5Q9C035 493 aa9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 WWP1Q9H0M0 922 aa9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 GBA3Q9H227 469 aa9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 STN1Q9H668 368 aaKnown RBP9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 GPN2Q9H9Y4 310 aaPredicted RBP9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 FAM8A1Q9UBU6 413 aa9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 CROTQ9UKG9 612 aa9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 PACSIN2Q9UNF0 486 aaPredicted RBP9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 RPS6KL1Q9Y6S9 549 aa9.56□□□□□ -0.88
RPRD1B-204ENST00000471511 GOLGA6L3A6NEY3 463 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 ZNF891A8MT65 544 aaPredicted RBP9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 STX7O15400 261 aaKnown RBP9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 PJA2O43164 708 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 LDB2O43679 373 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 SRP72O76094 671 aaKnown RBP9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 NDUFA10O95299 355 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 PRAMEF1O95521 474 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 PDGFAP04085 211 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 NTRK1P04629 796 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 POLBP06746 335 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 EBLN1P0CF75 366 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 RBP3P10745 1247 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 TPH1P17752 444 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 CTNNA2P26232 953 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 ZNF140P52738 457 aaPredicted RBP9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 GDF10P55107 478 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 EIF3EP60228 445 aaKnown RBP9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 KCNC4Q03721 635 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 SRSF1Q07955 248 aaKnown RBP eCLIP9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 XRCC4Q13426 336 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 ODF2Q5BJF6 829 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 LDLRAP1Q5SW96 308 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 FAM69BQ5VUD6 431 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 KCTD11Q693B1 232 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 CAPRIN2Q6IMN6 1127 aaKnown RBP9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 C6orf15Q6UXA7 325 aaPredicted RBP9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 BZW1Q7L1Q6 419 aaKnown RBP9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 TMEM151BQ8IW70 566 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 BRSK1Q8TDC3 778 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 ABHD17AQ96GS6 310 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 VAT1Q99536 393 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 ULBP3Q9BZM4 244 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 FAM117AQ9C073 453 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 RAB33BQ9H082 229 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 EPN3Q9H201 632 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 EPB41L1Q9H4G0 881 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 CLMPQ9H6B4 373 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 ASB8Q9H765 288 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 SMOXQ9NWM0 555 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 PIH1D1Q9NWS0 290 aaKnown RBP9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 TRHDEQ9UKU6 1024 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 NBASA2RRP1 2371 aa9.55□□□□□ -0.88
RPRD1B-204ENST00000471511 COL12A1Q99715 3063 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 ZNF106Q9H2Y7 1883 aaKnown RBP9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 OR5K3A6NET4 321 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 MGAT4DA6NG13 374 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 TOX3O15405 576 aaPredicted RBP9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 KCNN4O15554 427 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 MTSS1O43312 755 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 PPFIA2O75334 1257 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 RASSF9O75901 435 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 TPBGLP0DKB5 382 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 MTHFD1P11586 935 aaKnown RBP9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 PTMSP20962 102 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 LPOP22079 712 aaPredicted RBP9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 PDHA2P29803 388 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 PTPN7P35236 360 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 DLSTP36957 453 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 KPNA2P52292 529 aaKnown RBP9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 GEMP55040 296 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 RPS18P62269 152 aaKnown RBP9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 TLE1Q04724 770 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 GTF2H3Q13889 308 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 MAP7Q14244 749 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 ERV3-1Q14264 604 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 TAF1AQ15573 450 aaPredicted RBP9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 PRUNE1Q86TP1 453 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 PIANPQ8IYJ0 282 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 CCDC170Q8IYT3 715 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 TAB3Q8N5C8 712 aaPredicted RBP9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 CT55Q8WUE5 264 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 RBM41Q96IZ5 413 aaKnown RBP9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 DNAJC1Q96KC8 554 aaKnown RBP9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 SRPK1Q96SB4 655 aaKnown RBP9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 ZPBPQ9BS86 351 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 TRIM55Q9BYV6 548 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 IMP3Q9NV31 184 aaKnown RBP9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 HACD3Q9P035 362 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 SLC24A2Q9UI40 661 aa9.54□□□□□ -0.88
RPRD1B-204ENST00000471511 KCNMB2Q9Y691 235 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms