RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 PYGBP11216 843 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 NME1P15531 152 aaKnown RBP9.7□□□□□ -0.86
SF3A1-207ENST00000471342 CD1DP15813 335 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 AK4P27144 223 aaPredicted RBP9.7□□□□□ -0.86
SF3A1-207ENST00000471342 PREPP48147 710 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 WDR4P57081 412 aaKnown RBP9.7□□□□□ -0.86
SF3A1-207ENST00000471342 RAB10P61026 200 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 CTBSQ01459 385 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 OVGP1Q12889 678 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 CLCA4Q14CN2 919 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 OR4D1Q15615 310 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 CCSMST1Q4G0I0 132 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 AARS2Q5JTZ9 985 aaKnown RBP9.7□□□□□ -0.86
SF3A1-207ENST00000471342 SLC23A3Q6PIS1 610 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 DOK6Q6PKX4 331 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 CRTC3Q6UUV7 619 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 PIWIL4Q7Z3Z4 852 aaKnown RBP9.7□□□□□ -0.86
SF3A1-207ENST00000471342 SYT12Q8IV01 421 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 CPNE9Q8IYJ1 553 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 HEXDCQ8WVB3 486 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 EEF1AKMT1Q8WVE0 214 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 KCTD4Q8WVF5 259 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 CDKL2Q92772 493 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 NXNL1Q96CM4 212 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 KLHDC7BQ96G42 594 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 ELMO2Q96JJ3 720 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 WDR92Q96MX6 357 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 ATOH8Q96SQ7 321 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 PHOX2BQ99453 314 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 CCM2Q9BSQ5 444 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 LRRC61Q9BV99 259 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 C1QTNF7Q9BXJ2 289 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 RMI1Q9H9A7 625 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 COG4Q9H9E3 785 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 ERVMER34-1Q9H9K5 563 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 PARD6AQ9NPB6 346 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 RXFP3Q9NSD7 469 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 SPATS2LQ9NUQ6 558 aaKnown RBP9.7□□□□□ -0.86
SF3A1-207ENST00000471342 TBC1D29Q9UFV1 150 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 SLC39A10Q9ULF5 831 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 RUVBL2Q9Y230 463 aaKnown RBP9.7□□□□□ -0.86
SF3A1-207ENST00000471342 ANKRD6Q9Y2G4 727 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 HCN4Q9Y3Q4 1203 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 U3KQA8 63 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 CACNA1EQ15878 2313 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 OTOGLQ3ZCN5 2332 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 MUC6Q6W4X9 2439 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 A0A096LPK6 155 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 A0A1B0GTW7 788 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 UBA6A0AVT1 1052 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-207ENST00000471342 G3V2L1 256 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 CDC7O00311 574 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 CDX4O14627 284 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-207ENST00000471342 CASC3O15234 703 aaKnown RBP9.69□□□□□ -0.86
SF3A1-207ENST00000471342 MSH3P20585 1137 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 CNTFP26441 200 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 PMLP29590 882 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 ARRB2P32121 409 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 NBL1P41271 181 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 IRX4P78413 519 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 BNIP3Q12983 259 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 SIM2Q14190 667 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-207ENST00000471342 USP10Q14694 798 aaKnown RBP9.69□□□□□ -0.86
SF3A1-207ENST00000471342 TMED2Q15363 201 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 LPAL2Q16609 132 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 PHKG1Q16816 387 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 KRT71Q3SY84 523 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.69□□□□□ -0.86
SF3A1-207ENST00000471342 AGBL2Q5U5Z8 902 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 TCEAL6Q6IPX3 200 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 C16orf46Q6P387 395 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 OGFOD3Q6PK18 319 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 SBSNQ6UWP8 590 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 ABRAXAS1Q6UWZ7 409 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 C11orf74Q86VG3 221 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 LRRC56Q8IYG6 542 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-207ENST00000471342 PHACTR4Q8IZ21 702 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 SLC22A15Q8IZD6 547 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 C4orf33Q8N1A6 199 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 GPATCH11Q8N954 259 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 OR2I1PQ8NGU4 316 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 FAM174AQ8TBP5 190 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 ASB11Q8WXH4 323 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 INPP5DQ92835 1189 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 TCEAL3Q969E4 200 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 MTBPQ96DY7 904 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 LOXL4Q96JB6 756 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 RMDN2Q96LZ7 410 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 TIMM29Q9BSF4 260 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 ARGLU1Q9NWB6 273 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-207ENST00000471342 TRNAU1APQ9NX07 287 aaKnown RBP9.69□□□□□ -0.86
SF3A1-207ENST00000471342 ZNF624Q9P2J8 865 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-207ENST00000471342 GNPTGQ9UJJ9 305 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 NOVA2Q9UNW9 492 aaKnown RBP9.69□□□□□ -0.86
SF3A1-207ENST00000471342 KCNK6Q9Y257 313 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 ASB1Q9Y576 335 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 ACTL7BQ9Y614 415 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 COMMD10Q9Y6G5 202 aa9.69□□□□□ -0.86
SF3A1-207ENST00000471342 CACNB4O00305 520 aaPredicted RBP9.68□□□□□ -0.86
SF3A1-207ENST00000471342 ZBTB14O43829 449 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms