RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 IRF4Q15306 451 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 TGFBIQ15582 683 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 FBXO43Q4G163 708 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 LDLRAP1Q5SW96 308 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 ZNF678Q5SXM1 525 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 VWA5B1Q5TIE3 1220 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 SDE2Q6IQ49 451 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 MBOAT1Q6ZNC8 495 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 ZNF771Q7L3S4 317 aaPredicted RBP8.19□□□□□ -1.1
GTF3A-206ENST00000470606 HEATR4Q86WZ0 1026 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 RASGRP3Q8IV61 690 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 ADHFE1Q8IWW8 467 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 TRIM42Q8IWZ5 723 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 FRMD1Q8N878 549 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 PTGR2Q8N8N7 351 aaPredicted RBP8.19□□□□□ -1.1
GTF3A-206ENST00000470606 CCDC197Q8NCU1 140 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 PPP1R14CQ8TAE6 165 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 STAG3L4Q8TBR4 150 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 L3HYPDHQ96EM0 354 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 NSRP1Q9H0G5 558 aaKnown RBP8.19□□□□□ -1.1
GTF3A-206ENST00000470606 EBF2Q9HAK2 575 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 CD320Q9NPF0 282 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 FZD3Q9NPG1 666 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 ARHGEF3Q9NR81 526 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 FAM8A1Q9UBU6 413 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 PRKAB1Q9Y478 270 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 OR1A2Q9Y585 309 aa8.19□□□□□ -1.1
GTF3A-206ENST00000470606 TECTAO75443 2155 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 A0A0G2JND7 137 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 CCDC189A1A4V9 331 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 SLCO2B1O94956 709 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 OR56A5P0C7T3 313 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 MSH3P20585 1137 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 IMPDH1P20839 514 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 PDHA2P29803 388 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 TRIM23P36406 574 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 PREPP48147 710 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 KPNA2P52292 529 aaKnown RBP8.18□□□□□ -1.1
GTF3A-206ENST00000470606 HERVK_113P63132 956 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 CDK3Q00526 305 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 IFT88Q13099 833 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 TUBB3Q13509 450 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 BOP1Q14137 746 aaKnown RBP8.18□□□□□ -1.1
GTF3A-206ENST00000470606 INPP5AQ14642 412 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 UGT3A1Q6NUS8 523 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 TMEM220Q6QAJ8 160 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 ZNF852Q6ZMS4 543 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 PHYKPLQ8IUZ5 450 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 FITM2Q8N6M3 262 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 MAFAQ8NHW3 353 aaPredicted RBP8.18□□□□□ -1.1
GTF3A-206ENST00000470606 PIWIL2Q8TC59 973 aaKnown RBP8.18□□□□□ -1.1
GTF3A-206ENST00000470606 GANCQ8TET4 914 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 HMGB4Q8WW32 186 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 GRAMD1AQ96CP6 724 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 DCUN1D1Q96GG9 259 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 ERVK-6Q9BXR3 956 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 FBRSQ9HAH7 460 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 LMAN1LQ9HAT1 526 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 ZBTB26Q9HCK0 441 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 TRIM39Q9HCM9 518 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 TM7SF3Q9NS93 570 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 KCTD5Q9NXV2 234 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 SLC23A2Q9UGH3 650 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 HAO1Q9UJM8 370 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 ZNF225Q9UK10 706 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 RNF112Q9ULX5 631 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 CA5BQ9Y2D0 317 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 ARL2BPQ9Y2Y0 163 aa8.18□□□□□ -1.1
GTF3A-206ENST00000470606 TBC1D3DA0A087WVF3 549 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TBC1D3IA0A087WXS9 549 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TBC1D3EA0A087X179 549 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TBC1D3KA0A087X1G2 549 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 SLC5A10A0PJK1 596 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TBC1D3FA6NER0 549 aaPredicted RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 C19orf67A6NJJ6 358 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TMEM114B3SHH9 223 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 SUPT3HB4E1H0 165 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TBC1D3LB9A6J9 549 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TAPBPO15533 448 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 GRID2O43424 1007 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 NUAK1O60285 661 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 MAGEC1O60732 1142 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 RNGTTO60942 597 aaKnown RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 SUPT3HO75486 399 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 CDK14O94921 469 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 AP2A2O94973 939 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TBC1D3HP0C7X1 549 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 ALOX15P16050 662 aaPredicted RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 DGKAP23743 735 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 PRDX3P30048 256 aaKnown RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 IGFALSP35858 605 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 AQP5P55064 265 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 HNRNPH2P55795 449 aaKnown RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 SH3BP2P78314 561 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 DMTNQ08495 405 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 EOGTQ5NDL2 527 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TPRG1LQ5T0D9 272 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TBC1D3GQ6DHY5 549 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TBC1D3CQ6IPX1 549 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 KIAA1324Q6UXG2 1013 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms