RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 PCDHGA12O60330 932 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 TRIM16O95361 564 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 ESR1P03372 595 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 MYF5P13349 255 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 CCR7P32248 378 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 PHBP35232 272 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 CD151P48509 253 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 ARHGAP8P85298 464 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 LRP8Q14114 963 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 BRD3Q15059 726 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 STPG1Q5TH74 334 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 PTRHD1Q6GMV3 140 aaKnown RBP14.52□□□□□ -0.09
COL9A3-209ENST00000469852 DBX2Q6ZNG2 339 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 AMZ2Q86W34 360 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 ZC3HC1Q86WB0 502 aaKnown RBP14.52□□□□□ -0.09
COL9A3-209ENST00000469852 LRRC6Q86X45 466 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 MYRIPQ8NFW9 859 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 OR2L2Q8NH16 312 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 GIMAP7Q8NHV1 300 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 PATE1Q8WXA2 126 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 CCM2Q9BSQ5 444 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 AARSD1Q9BTE6 412 aaKnown RBP14.52□□□□□ -0.09
COL9A3-209ENST00000469852 GSDMCQ9BYG8 508 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 OSGEPL1Q9H4B0 414 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 PRDM8Q9NQV8 689 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 SCHIP1Q9P0W5 487 aaPredicted RBP14.52□□□□□ -0.09
COL9A3-209ENST00000469852 PCDHB1Q9Y5F3 818 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 DNMT3AQ9Y6K1 912 aaPredicted RBP14.52□□□□□ -0.09
COL9A3-209ENST00000469852 NCOR2Q9Y618 2525 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 A0A087WUV0 522 aaPredicted RBP14.51□□□□□ -0.09
COL9A3-209ENST00000469852 A6NCN8 305 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 PFDN6O15212 129 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 SNX2O60749 519 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 FTH1P02794 183 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 SHBGP04278 402 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 ABHD2P08910 425 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 BRAFP15056 766 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 MCM3P25205 808 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 RPL10P27635 214 aaKnown RBP14.51□□□□□ -0.09
COL9A3-209ENST00000469852 GCAP28676 217 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 PDHA2P29803 388 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 HSD17B3P37058 310 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 PREPP48147 710 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 CSE1LP55060 971 aaKnown RBP14.51□□□□□ -0.09
COL9A3-209ENST00000469852 CDKN2DP55273 166 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 DMPKQ09013 629 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 BOP1Q14137 746 aaKnown RBP14.51□□□□□ -0.09
COL9A3-209ENST00000469852 SEPT7Q16181 437 aaKnown RBP14.51□□□□□ -0.09
COL9A3-209ENST00000469852 EMBQ6PCB8 327 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 PIM3Q86V86 326 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 GKN2Q86XP6 184 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 VRK3Q8IV63 474 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 CFAP206Q8IYR0 622 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 EID2Q8N6I1 236 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 FAM46DQ8NEK8 389 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 GABPB2Q8TAK5 448 aaPredicted RBP14.51□□□□□ -0.09
COL9A3-209ENST00000469852 HM13Q8TCT9 377 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 UBLCP1Q8WVY7 318 aaPredicted RBP14.51□□□□□ -0.09
COL9A3-209ENST00000469852 ELMO1Q92556 727 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 CDKL2Q92772 493 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 CAVIN3Q969G5 261 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 CAMK1GQ96NX5 476 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 CYTH2Q99418 400 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 COG4Q9H9E3 785 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 SARS2Q9NP81 518 aaKnown RBP14.51□□□□□ -0.09
COL9A3-209ENST00000469852 PSMD13Q9UNM6 376 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 VPS9D1Q9Y2B5 631 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 WDR37Q9Y2I8 494 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 MTO1Q9Y2Z2 717 aaKnown RBP14.51□□□□□ -0.09
COL9A3-209ENST00000469852 PCDHGB2Q9Y5G2 931 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 CSNK1G3Q9Y6M4 447 aa14.51□□□□□ -0.09
COL9A3-209ENST00000469852 LY6G6EA0A0G2JKS1 128 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 C17orf113A0A1B0GUU1 675 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 B4DGG1 531 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 QSOX1O00391 747 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 ANXA6P08133 673 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 AOAHP28039 575 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 CLCN7P51798 805 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 CLCNKAP51800 687 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 METRNLQ641Q3 311 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 NAGSQ8N159 534 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 GPATCH11Q8N954 259 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 SIDT2Q8NBJ9 832 aaKnown RBP14.5□□□□□ -0.09
COL9A3-209ENST00000469852 SPDYE1Q8NFV5 336 aaPredicted RBP14.5□□□□□ -0.09
COL9A3-209ENST00000469852 OR4C6Q8NH72 309 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 VPS39Q96JC1 886 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 PAFAH2Q99487 392 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 RBBP8Q99708 897 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 OLFM1Q99784 485 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 CPNE1Q99829 537 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 RHOJQ9H4E5 214 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 NSMCE4AQ9NXX6 385 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 NLGN3Q9NZ94 848 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 SIRPGQ9P1W8 387 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 CDYLQ9Y232 598 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 U3KQA8 63 aa14.5□□□□□ -0.09
COL9A3-209ENST00000469852 TRBV23OR9-2A0A075B6M9 112 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 FAM95CA0A1B0GW59 222 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 SLC5A10A0PJK1 596 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 HMX2A2RU54 273 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms