RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 SH2D4AQ9H788 454 aa2.03□□□□□ -2.08
CCDC93-205ENST00000466171 ASAH2Q9NR71 780 aa2.03□□□□□ -2.08
CCDC93-205ENST00000466171 DLGAP2Q9P1A6 1054 aa2.03□□□□□ -2.08
CCDC93-205ENST00000466171 ACAD8Q9UKU7 415 aa2.03□□□□□ -2.08
CCDC93-205ENST00000466171 PCDHGB4Q9UN71 923 aa2.03□□□□□ -2.08
CCDC93-205ENST00000466171 R3HDM2Q9Y2K5 976 aaKnown RBP2.03□□□□□ -2.08
CCDC93-205ENST00000466171 KLHL20Q9Y2M5 609 aa2.03□□□□□ -2.08
CCDC93-205ENST00000466171 AAR2Q9Y312 384 aaKnown RBP2.03□□□□□ -2.08
CCDC93-205ENST00000466171 LYVE1Q9Y5Y7 322 aa2.03□□□□□ -2.08
CCDC93-205ENST00000466171 A0A087X002 238 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 A0A1W2PPI3 338 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 FRMD3A2A2Y4 597 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 DUXAA6NLW8 204 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 PRR32B1ATL7 298 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 H0YIN7 160 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 H3BQ06 376 aaPredicted RBP2.02□□□□□ -2.09
CCDC93-205ENST00000466171 STARD3NLO95772 234 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 EGFP01133 1207 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 TRIM49P0CI25 452 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 TRIM49CP0CI26 452 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 PORP16435 677 aaPredicted RBP2.02□□□□□ -2.09
CCDC93-205ENST00000466171 GNAZP19086 355 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 GCH1P30793 250 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 CDAP32320 146 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 HOXD13P35453 343 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 PIK3CAP42336 1068 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 CCR10P46092 362 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 GABRB2P47870 512 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 ARCN1P48444 511 aaKnown RBP2.02□□□□□ -2.09
CCDC93-205ENST00000466171 BMXP51813 675 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 F2RL1P55085 397 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 PRAMEP78395 509 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 CSTF3Q12996 717 aaKnown RBP2.02□□□□□ -2.09
CCDC93-205ENST00000466171 CHAF1BQ13112 559 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 KCTD2Q14681 263 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 KIR2DS3Q14952 304 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 NAB2Q15742 525 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 DCST1Q5T197 706 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 SIGIRRQ6IA17 410 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 NCEH1Q6PIU2 408 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 CHST9Q7L1S5 443 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 ENOSF1Q7L5Y1 443 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 SZRD1Q7Z422 152 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 ARHGAP12Q8IWW6 846 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 TEX11Q8IYF3 940 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 OR14L1PQ8NHC6 308 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 OR2T6Q8NHC8 308 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 MRGPRDQ8TDS7 321 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 FAM120BQ96EK7 910 aaKnown RBP2.02□□□□□ -2.09
CCDC93-205ENST00000466171 ZNF414Q96IQ9 312 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 RSRC1Q96IZ7 334 aaKnown RBP2.02□□□□□ -2.09
CCDC93-205ENST00000466171 SLC41A2Q96JW4 573 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 C1orf74Q96LT6 269 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 NCAPGQ9BPX3 1015 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 FAM110AQ9BQ89 295 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 SYT11Q9BT88 431 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 MXD3Q9BW11 206 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 MAK16Q9BXY0 300 aaKnown RBP2.02□□□□□ -2.09
CCDC93-205ENST00000466171 SLC28A3Q9HAS3 691 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 RANGRFQ9HD47 186 aaPredicted RBP2.02□□□□□ -2.09
CCDC93-205ENST00000466171 ATAD3AQ9NVI7 634 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 KLHL8Q9P2G9 620 aaPredicted RBP2.02□□□□□ -2.09
CCDC93-205ENST00000466171 RPS6KA6Q9UK32 745 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 FBXL2Q9UKC9 423 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 KCNJ14Q9UNX9 436 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 MTMR6Q9Y217 621 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 CEPT1Q9Y6K0 416 aa2.02□□□□□ -2.09
CCDC93-205ENST00000466171 UTYO14607 1347 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 STK36Q9NRP7 1315 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 A0A1W2PQ09 198 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 A0A1W2PQF6 199 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 C1orf226A1L170 272 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 B4DLN1 442 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 ANKRD66B4E2M5 251 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 SLC25A12O75746 678 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 TSPAN9O75954 239 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 IPO7O95373 1038 aaKnown RBP2.01□□□□□ -2.09
CCDC93-205ENST00000466171 RB1P06400 928 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 HSP90AA1P07900 732 aaKnown RBP2.01□□□□□ -2.09
CCDC93-205ENST00000466171 HMBSP08397 361 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 CSH1P0DML2 217 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 CSH2P0DML3 217 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 CEACAM1P13688 526 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 AKR1B1P15121 316 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 ACADSP16219 412 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 ZNF182P17025 639 aaPredicted RBP2.01□□□□□ -2.09
CCDC93-205ENST00000466171 KRT20P35900 424 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 GARSP41250 739 aaKnown RBP2.01□□□□□ -2.09
CCDC93-205ENST00000466171 CDH8P55286 799 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 NUCB1Q02818 461 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 RUNX1T1Q06455 604 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 SPOCK1Q08629 439 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 NIPAL4Q0D2K0 466 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 OLIG2Q13516 323 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 DUSP28Q4G0W2 176 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 XKR6Q5GH73 641 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 FFAR4Q5NUL3 377 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 ALS2CLQ60I27 953 aa2.01□□□□□ -2.09
CCDC93-205ENST00000466171 KIAA0930Q6ICG6 404 aaPredicted RBP2.01□□□□□ -2.09
CCDC93-205ENST00000466171 TMEM154Q6P9G4 183 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms