RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 G3V2T6 193 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 ARVCFO00192 962 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 BCAS1O75363 584 aaPredicted RBP12.28□□□□□ -0.44
HDAC4-208ENST00000463007 SOAT2O75908 522 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 NADKO95544 446 aaPredicted RBP12.28□□□□□ -0.44
HDAC4-208ENST00000463007 GSTT2P0CG29 244 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 GSTT2BP0CG30 244 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 PSMB9P28065 219 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 HTR1BP28222 390 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 PSMD8P48556 350 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 ACADVLP49748 655 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 HLCSP50747 726 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 OXCT1P55809 520 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 TSPY1Q01534 308 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 CREB5Q02930 508 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 EFEMP1Q12805 493 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 SLC13A2Q13183 592 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 MRPL58Q14197 206 aaKnown RBP12.28□□□□□ -0.44
HDAC4-208ENST00000463007 NR6A1Q15406 480 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 PDCD4Q53EL6 469 aaKnown RBP12.28□□□□□ -0.44
HDAC4-208ENST00000463007 DHRS4L2Q6PKH6 230 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 TBC1D21Q8IYX1 336 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 MINDY1Q8N5J2 469 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 C8orf48Q96LL4 319 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 SPC25Q9HBM1 224 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 TBCCD1Q9NVR7 557 aa12.28□□□□□ -0.44
HDAC4-208ENST00000463007 A0A1W2PP18 115 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 MOXD2PA6NHM9 499 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 H0Y858 1186 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 OR1I1O60431 355 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 EOMESO95936 686 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 MMP2P08253 660 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 MBL2P11226 248 aaPredicted RBP12.27□□□□□ -0.44
HDAC4-208ENST00000463007 ZNF12P17014 697 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 HOXD12P35452 270 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 HTR6P50406 440 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 GTF2H3Q13889 308 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 PTGR1Q14914 329 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 DDR2Q16832 855 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 GCNT7Q6ZNI0 430 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 SYVN1Q86TM6 617 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 THEM5Q8N1Q8 247 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 PSMA8Q8TAA3 256 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 SLC22A17Q8WUG5 538 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 FUBP3Q96I24 572 aaKnown RBP eCLIP12.27□□□□□ -0.441e-7■■■■■ 36.2
HDAC4-208ENST00000463007 SDR39U1Q9NRG7 319 aaPredicted RBP12.27□□□□□ -0.44
HDAC4-208ENST00000463007 ABCB10Q9NRK6 738 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 RASSF1Q9NS23 344 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 ZNHIT2Q9UHR6 403 aa12.27□□□□□ -0.44
HDAC4-208ENST00000463007 PTBP2Q9UKA9 531 aaKnown RBP12.27□□□□□ -0.44
HDAC4-208ENST00000463007 MITFO75030 526 aaPredicted RBP12.27□□□□□ -0.45
HDAC4-208ENST00000463007 ECI2O75521 394 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 WISP3O95389 354 aaPredicted RBP12.27□□□□□ -0.45
HDAC4-208ENST00000463007 VNN2O95498 520 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 IGLV3-27P01718 113 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 G6PDP11413 515 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 CKBP12277 381 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 HSD17B1P14061 328 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 IDO1P14902 403 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 ZNF37AP17032 561 aaPredicted RBP12.27□□□□□ -0.45
HDAC4-208ENST00000463007 POLD2P49005 469 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 GPR15P49685 360 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 ANKS6Q68DC2 871 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 ZNF773Q6PK81 442 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 THAP5Q7Z6K1 395 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 SPATA2LQ8IUW3 424 aaPredicted RBP12.27□□□□□ -0.45
HDAC4-208ENST00000463007 LRRC49Q8IUZ0 686 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 SLC43A3Q8NBI5 491 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 NDNFQ8TB73 568 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 TUBA8Q9NY65 449 aaPredicted RBP12.27□□□□□ -0.45
HDAC4-208ENST00000463007 ERGIC3Q9Y282 383 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 POLR3HQ9Y535 204 aaPredicted RBP12.27□□□□□ -0.45
HDAC4-208ENST00000463007 PCDHGA11Q9Y5H2 935 aa12.27□□□□□ -0.45
HDAC4-208ENST00000463007 TBC1D4O60343 1298 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 DFNA5O60443 496 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 NIPSNAP2O75323 286 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 DEAF1O75398 565 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-208ENST00000463007 CHEK2O96017 543 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 GPIP06744 558 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 KCNAB2Q13303 367 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 PTPRNQ16849 979 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 GTDC1Q4AE62 458 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 RAP1GAP2Q684P5 730 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 RBM23Q86U06 439 aaKnown RBP12.26□□□□□ -0.45
HDAC4-208ENST00000463007 ANKRD46Q86W74 232 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 SPARTQ8N0X7 666 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 TEX26Q8N6G2 289 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 SIDT2Q8NBJ9 832 aaKnown RBP12.26□□□□□ -0.45
HDAC4-208ENST00000463007 OR13F1Q8NGS4 319 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 METTL6Q8TCB7 284 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 FAM162AQ96A26 154 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 PRKD2Q9BZL6 878 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 CARS2Q9HA77 564 aaKnown RBP12.26□□□□□ -0.45
HDAC4-208ENST00000463007 AMBNQ9NP70 447 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 SLC30A1Q9Y6M5 507 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 A0A0C4DFX4 3053 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 ACVRL1P37023 503 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 HPCAL1P37235 193 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 MAGEA11P43364 429 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 TPTEP56180 551 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms