RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 SLC4A1P02730 911 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 C9P02748 559 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 PYGLP06737 847 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 BPIP17213 487 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 HLA-DPA1P20036 260 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 CA5AP35218 305 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 MAPK9P45984 424 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 GEMP55040 296 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 RPS6KA1Q15418 735 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 SLC1A5Q15758 541 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 KCTD11Q693B1 232 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 ITPRIPL1Q6GPH6 555 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 DENND5AQ6IQ26 1287 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 SLC25A41Q8N5S1 370 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 TTC13Q8NBP0 860 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 GPR26Q8NDV2 337 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 TRIM58Q8NG06 486 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 APOBEC4Q8WW27 367 aaKnown RBP7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 PSMG3-AS1Q96PY0 264 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 ALS2CR12Q96Q35 445 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 TMEM121Q9BTD3 319 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 EFHD1Q9BUP0 239 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 FICDQ9BVA6 458 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 ZFYVE1Q9HBF4 777 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 PRDM8Q9NQV8 689 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 PKD2L2Q9NZM6 624 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 SCHIP1Q9P0W5 487 aaPredicted RBP7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 ATXN10Q9UBB4 475 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 CPNE7Q9UBL6 633 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 ZNHIT2Q9UHR6 403 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 CROTQ9UKG9 612 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 TMPRSS11EQ9UL52 423 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 KCNMB2Q9Y691 235 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 RPS6KL1Q9Y6S9 549 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 AKAP9Q99996 3911 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 NUP210LQ5VU65 1888 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 APCP25054 2843 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 CELSR1Q9NYQ6 3014 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 KIR2DS5A0A0G2JLQ3 304 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 A0A0G2JNG1 304 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 GOLGA6L9A6NEM1 432 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 KIR2DS3K7RE56 304 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 POLR1CO15160 346 aaPredicted RBP7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 GPR39O43194 453 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 NUAK1O60285 661 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 METTL18O95568 372 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 ASMTLO95671 621 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 PDGFAP04085 211 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 NTRK1P04629 796 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 ZNF8P17098 575 aaPredicted RBP7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 TCN2P20062 427 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 UQCRFS1P47985 274 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 CLCNKAP51800 687 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 SH3BP2P78314 561 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 MC1RQ01726 317 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 KLRB1Q12918 225 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 KIR2DS5Q14953 304 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 KHDC1Q4VXA5 237 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 ZNF648Q5T619 568 aaPredicted RBP7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 ALS2CLQ60I27 953 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 C16orf46Q6P387 395 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 RANBP10Q6VN20 620 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 MICALCLQ6ZW33 695 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 PRUNE1Q86TP1 453 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 TMEM135Q86UB9 458 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 SLC9B2Q86UD5 537 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 LAPTM4BQ86VI4 370 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 FAM26EQ8N5C1 309 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 ESX1Q8N693 406 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 FAM71DQ8N9W8 422 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 GLIS1Q8NBF1 620 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 GALNT6Q8NCL4 622 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 CCHCR1Q8TD31 782 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 UBE2Q2Q8WVN8 375 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 C1orf54Q8WWF1 131 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 C9orf72Q96LT7 481 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 PLEKHG4BQ96PX9 1271 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 APOL2Q9BQE5 337 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 GPR63Q9BZJ6 419 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 ULBP3Q9BZM4 244 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 TRIT1Q9H3H1 467 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 EPB41L1Q9H4G0 881 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 FAM83DQ9H4H8 585 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 ZNF768Q9H5H4 540 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 RMI1Q9H9A7 625 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 UCK1Q9HA47 277 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 ARFGAP3Q9NP61 516 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 IL17CQ9P0M4 197 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 ZNF624Q9P2J8 865 aaPredicted RBP7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 KCTD3Q9Y597 815 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 SLC30A1Q9Y6M5 507 aa7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 MDC1Q14676 2089 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 DIDO1Q9BTC0 2240 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-210ENST00000462553 DOCK10Q96BY6 2186 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 CNTRLQ7Z7A1 2325 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 BLACEA4D250 179 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 USP27XA6NNY8 438 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 CHUKO15111 745 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 GRID2O43424 1007 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 BUD23O43709 281 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms