RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 TXLNGQ9NUQ3 528 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 C5AR2Q9P296 337 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 GIMAP2Q9UG22 337 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 PPIEQ9UNP9 301 aaKnown RBP3.28□□□□□ -1.88
RFC4-211ENST00000460408 VDAC3Q9Y277 283 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 DLGAP4Q9Y2H0 992 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 TRIP12Q14669 1992 aaPredicted RBP3.28□□□□□ -1.88
RFC4-211ENST00000460408 TCRBV21S2A2A0A5A6 115 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 FEZF1A0PJY2 475 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 HEPACAM2A8MVW5 462 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 HNRNPCL2B2RXH8 293 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 TO15178 435 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 ZNHIT1O43257 154 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 ZBTB43O43298 467 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 DKC1O60832 514 aaKnown RBP eCLIP3.27□□□□□ -1.89
RFC4-211ENST00000460408 WDR1O75083 606 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 TBX10O75333 385 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 PAPSS2O95340 614 aaPredicted RBP3.27□□□□□ -1.89
RFC4-211ENST00000460408 GCNT3O95395 438 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 GM2AP17900 193 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 ART1P52961 327 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 KRTAP10-5P60370 271 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 TROAPQ12815 778 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 GTF2H2Q13888 395 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 KRT33BQ14525 404 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 CCDC96Q2M329 555 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 KIF19Q2TAC6 998 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 CRY2Q49AN0 593 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 CBWD6Q4V339 395 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 CBWD3Q5JTY5 395 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 C9orf152Q5JTZ5 239 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 NADSYN1Q6IA69 706 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 TMEM211Q6ICI0 200 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 GTF2H2CQ6P1K8 395 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 PRSS57Q6UWY2 283 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 KMT5CQ86Y97 462 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.27□□□□□ -1.89
RFC4-211ENST00000460408 ZNF595Q8IYB9 648 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 C1orf52Q8N6N3 182 aaKnown RBP3.27□□□□□ -1.89
RFC4-211ENST00000460408 TDRD5Q8NAT2 981 aaKnown RBP3.27□□□□□ -1.89
RFC4-211ENST00000460408 MCUQ8NE86 351 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 CFAP61Q8NHU2 1237 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 TMEM255BQ8WV15 326 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 NUDCD2Q8WVJ2 157 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 PTERQ96BW5 349 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 FAM84BQ96KN1 310 aaPredicted RBP3.27□□□□□ -1.89
RFC4-211ENST00000460408 TTC14Q96N46 770 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 SYT17Q9BSW7 474 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 GPR88Q9GZN0 384 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 LRMDAQ9H2I8 198 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 SLA2Q9H6Q3 261 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 UBTD1Q9HAC8 227 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 CHMP1AQ9HD42 196 aaPredicted RBP3.27□□□□□ -1.89
RFC4-211ENST00000460408 MBNL1Q9NR56 388 aaKnown RBP3.27□□□□□ -1.89
RFC4-211ENST00000460408 OLAHQ9NV23 265 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 TAB2Q9NYJ8 693 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 WDR35Q9P2L0 1181 aa3.27□□□□□ -1.89
RFC4-211ENST00000460408 TAF1P21675 1872 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 HMGXB3Q12766 1538 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 IGHV4OR15-8A0A075B7B6 117 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 A8MXE2 369 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 ANKRD66B4E2M5 251 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 TULP2O00295 520 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 DVL1O14640 695 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 CLGNO14967 610 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 EIF3DO15371 548 aaKnown RBP eCLIP3.26□□□□□ -1.89
RFC4-211ENST00000460408 SPRY1O43609 319 aaPredicted RBP3.26□□□□□ -1.89
RFC4-211ENST00000460408 TGFB3P10600 412 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 VPREB1P12018 145 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 CDH1P12830 882 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 POLR2CP19387 275 aaPredicted RBP3.26□□□□□ -1.89
RFC4-211ENST00000460408 CCR3P51677 355 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 FUT6P51993 359 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 CD81P60033 236 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 SNRPEP62304 92 aaKnown RBP3.26□□□□□ -1.89
RFC4-211ENST00000460408 UBXN2AP68543 259 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 PLIN5Q00G26 463 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 PNRC1Q12796 327 aaPredicted RBP3.26□□□□□ -1.89
RFC4-211ENST00000460408 ALCAMQ13740 583 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 ZNF585BQ52M93 769 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 TMEM35AQ53FP2 167 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 ALS2CLQ60I27 953 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 FBXO39Q8N4B4 442 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 TC2NQ8N9U0 490 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 SORCS1Q8WY21 1168 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 PHF21AQ96BD5 680 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 ARSGQ96EG1 525 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 CDCA5Q96FF9 252 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 ZNF582Q96NG8 517 aaPredicted RBP3.26□□□□□ -1.89
RFC4-211ENST00000460408 MEIS3Q99687 375 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 OLFM1Q99784 485 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 C16orf70Q9BSU1 422 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 CCDC106Q9BWC9 280 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 OR10A4Q9H209 315 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 SEMA6AQ9H2E6 1030 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 C6orf106Q9H6K1 298 aaPredicted RBP3.26□□□□□ -1.89
RFC4-211ENST00000460408 LRRC4Q9HBW1 653 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 TCP11L1Q9NUJ3 509 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 RHCGQ9UBD6 479 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms