RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 FBXO47Q5MNV8 452 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 NOTUMQ6P988 496 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 KLHL24Q6TFL4 600 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 KCTD7Q96MP8 289 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 FAM105AQ9NUU6 356 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 CTSHP09668 335 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 USP17L7P0C7H9 530 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 CCR10P46092 362 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 RHOAP61586 193 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 CDKL1Q00532 357 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 LRP8Q14114 963 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 SF3B4Q15427 424 aaKnown RBP eCLIP12.2□□□□□ -0.464e-7■■□□□ 11.6
NEDD4L-208ENST00000456173 ANKRD26P1Q6NSI1 321 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 CGB2Q6NT52 195 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 TOMM5Q8N4H5 51 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 C12orf29Q8N999 325 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 DENND1AQ8TEH3 1009 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 ESAMQ96AP7 390 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 ADAMTS10Q9H324 1103 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 POPDC2Q9HBU9 364 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 AAASQ9NRG9 546 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 TAS2R3Q9NYW6 316 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 NUFIP1Q9UHK0 495 aaKnown RBP12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 PCDHB8Q9UN66 801 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 GON4LQ3T8J9 2241 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 DISC1C4P0D8 188 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 PSMD10O75832 226 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 ANXA5P08758 320 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 DARSP14868 501 aaKnown RBP12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 GNPDA1P46926 289 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 FGFBP1Q14512 234 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 IQCCQ4KMZ1 466 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 CDHR3Q6ZTQ4 885 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 LINGO2Q7L985 606 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 NT5DC4Q86YG4 428 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 APOLD1Q96LR9 279 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 TSNAXQ99598 290 aaKnown RBP12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 RTFDC1Q9BY42 306 aaPredicted RBP12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 BPIFA1Q9NP55 256 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 CMAHPQ9Y471 501 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 NMBRP28336 390 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 CSTF2P33240 577 aaKnown RBP eCLIP12.2□□□□□ -0.463e-7■■■■□ 22.2
NEDD4L-208ENST00000456173 HOXD13P35453 343 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 TNFSF9P41273 254 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 PGDP52209 483 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 TAS2R39P59534 338 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 PPP1R3AQ16821 1122 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 XRRA1Q6P2D8 792 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 FBXL19Q6PCT2 694 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 OTOP3Q7RTS5 596 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 SNX20Q7Z614 316 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 KBTBD6Q86V97 674 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 LZTR1Q8N653 840 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 SPERTQ8NA61 448 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 OR5J2Q8NH18 312 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 ZFP90Q8TF47 636 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 LPAR1Q92633 364 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 AURKBQ96GD4 344 aaPredicted RBP12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 CSPG4P5Q96PW8 444 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 TEFMQ96QE5 360 aaKnown RBP12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 ULBP1Q9BZM6 244 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 DPAGT1Q9H3H5 408 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 SIRPGQ9P1W8 387 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 HCN2Q9UL51 889 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 CORO2BQ9UQ03 480 aa12.2□□□□□ -0.46
NEDD4L-208ENST00000456173 M0R036 132 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 CAPN15O75808 1086 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 RPL10P27635 214 aaKnown RBP12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 OR1E1P30953 314 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 AP3S2P59780 193 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 ATP6V0D1P61421 351 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 BTN3A2P78410 334 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 KCNAB2Q13303 367 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 VEPH1Q14D04 833 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 FAM174BQ3ZCQ3 159 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 TOR1AIP1Q5JTV8 583 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 ZNF767PQ75MW2 155 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 CEP76Q8TAP6 659 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 GAL3ST3Q96A11 431 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 LPIN3Q9BQK8 851 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 FDXACB1Q9BRP7 624 aaPredicted RBP12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 RAD18Q9NS91 495 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 MAN2B2Q9Y2E5 1009 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 DEPDC5O75140 1603 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 KANTRA0A1W2PQU2 76 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 CCL22O00626 93 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 PRMT5O14744 637 aaPredicted RBP12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 VILLO15195 856 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 DIRAS1O95057 198 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 EFNA1P20827 205 aaPredicted RBP12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 MNDAP41218 407 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 KIR3DL1P43629 444 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 DGKEP52429 567 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 EEFSECP57772 596 aaKnown RBP12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 LCP2Q13094 533 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 CDKL4Q5MAI5 379 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 MOB2Q70IA6 237 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 TICAM1Q8IUC6 712 aa12.19□□□□□ -0.46
NEDD4L-208ENST00000456173 SLC35B2Q8TB61 432 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms