RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 DCUN1D5Q9BTE7 237 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 TBCDQ9BTW9 1192 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SLA2Q9H6Q3 261 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PLEKHA1Q9HB21 404 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PIDD1Q9HB75 910 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SENP2Q9HC62 589 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 UCKL1Q9NWZ5 548 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 TELO2Q9Y4R8 837 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 MAU2Q9Y6X3 613 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SLIT2O94813 1529 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 CLRN2A0PK11 232 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PLOD3O60568 738 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ADORA1P30542 326 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 TCEAL1Q15170 157 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 FBXO31Q5XUX0 539 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 TCTEX1D2Q8WW35 142 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 RERGQ96A58 199 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SLC47A1Q96FL8 570 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 KLHL5Q96PQ7 755 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 KIF25Q9UIL4 384 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SNX10Q9Y5X0 201 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 TREHO43280 583 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 B3GALNT1O75752 331 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 LRG1P02750 347 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 THP07101 528 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 TCF7P36402 384 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 GLRBP48167 497 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 VEGFCP49767 419 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 GALNT1Q10472 559 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 OTUD3Q5T2D3 398 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PIGWQ7Z7B1 504 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 OR5J2Q8NH18 312 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 FAM151AQ8WW52 585 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 TMEM74Q96NL1 305 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 DOLKQ9UPQ8 538 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ARHGAP32A7KAX9 2087 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PTPN13Q12923 2485 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 NPIPA5A0A0B4J1W7 369 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PTGES3LE9PB15 166 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 RGS7P49802 495 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 FSTL1Q12841 308 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PLA2G4EQ3MJ16 856 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PIK3R6Q5UE93 754 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF773Q6PK81 442 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 FAM131AQ6UXB0 335 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 HACD2Q6Y1H2 254 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SPATA6LQ8N4H0 392 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 STOML3Q8TAV4 291 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SELENOMQ8WWX9 145 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 CCDC86Q9H6F5 360 aaKnown RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 POPDC3Q9HBV1 291 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 DNAJB9Q9UBS3 223 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SRP68Q9UHB9 627 aaKnown RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 AGRPO00253 132 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SCAMP1O15126 338 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 RASGRP1O95267 797 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 BPGMP07738 259 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 CDH1P12830 882 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 DNAJA1P31689 397 aaKnown RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 GRIA4P48058 902 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 GJA9P57773 515 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 TAS2R41P59536 307 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 UBXN2AP68543 259 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 EIF4HQ15056 248 aaKnown RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SLC9B1Q4ZJI4 515 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 CHRDL2Q6WN34 429 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 WDR53Q7Z5U6 358 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 LDHDQ86WU2 507 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 LRRC71Q8N4P6 559 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PNPLA2Q96AD5 504 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 TLCD1Q96CP7 247 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 CYB5R1Q9UHQ9 305 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PIN4Q9Y237 131 aaKnown RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 FAM234BA2RU67 622 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 MAGEA6P43360 314 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ERVK-24P63145 666 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 GIT2Q14161 759 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 GXYLT1Q4G148 440 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ALG10Q5BKT4 473 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SLC26A9Q7LBE3 791 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 C10orf53Q8N6V4 93 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 HORMAD2Q8N7B1 307 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SLC16A10Q8TF71 515 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SHC3Q92529 594 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PANX1Q96RD7 426 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 DPAGT1Q9H3H5 408 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 GLTPQ9NZD2 209 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PCDHGA11Q9Y5H2 935 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 VSTM5A8MXK1 200 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ADAM10O14672 748 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 GKN3PP0CG01 181 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 HOXB9P17482 250 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 GALK2Q01415 458 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 DPYSL3Q14195 570 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ARMC12Q5T9G4 340 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 RAB11FIP2Q7L804 512 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 UNC5CLQ8IV45 518 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF283Q8N7M2 679 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 HJURPQ8NCD3 748 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms