RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 PPP2CBP62714 309 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 PPP2CAP67775 309 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 CDK3Q00526 305 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 NFKB2Q00653 900 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 SFSWAPQ12872 951 aaKnown RBP5.9□□□□□ -1.46
SDC4P-201ENST00000453285 LRRC32Q14392 662 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 INPP5AQ14642 412 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 UBXN2BQ14CS0 331 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 IRF4Q15306 451 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 TSNQ15631 228 aaKnown RBP5.9□□□□□ -1.46
SDC4P-201ENST00000453285 PPP1R3AQ16821 1122 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 BCL7AQ4VC05 210 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 UNC50Q53HI1 259 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 TMEM31Q5JXX7 168 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 PLEKHS1Q5SXH7 462 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 TBC1D3GQ6DHY5 549 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 TBC1D3CQ6IPX1 549 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 FOXR1Q6PIV2 292 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 TMEM220Q6QAJ8 160 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 SBSNQ6UWP8 590 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 TRIM67Q6ZTA4 783 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 C11orf96Q7Z7L8 435 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 FAM124AQ86V42 546 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 TRIM69Q86WT6 500 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 HEATR4Q86WZ0 1026 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 PHYKPLQ8IUZ5 450 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 ZNF547Q8IVP9 402 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 UBALD2Q8IYN6 164 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 TBC1D3Q8IZP1 549 aaPredicted RBP5.9□□□□□ -1.46
SDC4P-201ENST00000453285 SIX5Q8N196 739 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 FLCNQ8NFG4 579 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 STAG3L4Q8TBR4 150 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 HMGB4Q8WW32 186 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 DLG3Q92796 817 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 CLDN23Q96B33 292 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 GRAMD1AQ96CP6 724 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 L3HYPDHQ96EM0 354 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 SHDQ96IW2 340 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 HIC2Q96JB3 615 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 SEC16BQ96JE7 1060 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 LINC00615Q96LM1 132 aaPredicted RBP5.9□□□□□ -1.46
SDC4P-201ENST00000453285 CCM2Q9BSQ5 444 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 TSSK1BQ9BXA7 367 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 DRC3Q9H069 523 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 FAM107BQ9H098 131 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 EBF2Q9HAK2 575 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 KCNK13Q9HB14 408 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 POLMQ9NP87 494 aaPredicted RBP5.9□□□□□ -1.46
SDC4P-201ENST00000453285 ACSS2Q9NR19 701 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 THAP1Q9NVV9 213 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 NCKIPSDQ9NZQ3 722 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 RAPGEFL1Q9UHV5 662 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 HAO1Q9UJM8 370 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 ADAMTS6Q9UKP5 1117 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 FBXL21Q9UKT6 434 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 MRPS17Q9Y2R5 130 aaKnown RBP5.9□□□□□ -1.46
SDC4P-201ENST00000453285 TMEM98Q9Y2Y6 226 aa5.9□□□□□ -1.46
SDC4P-201ENST00000453285 CROCCQ5TZA2 2017 aa5.9□□□□□ -1.47
SDC4P-201ENST00000453285 ARID1BQ8NFD5 2236 aaPredicted RBP5.89□□□□□ -1.47
SDC4P-201ENST00000453285 CABIN1Q9Y6J0 2220 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 C17orf113A0A1B0GUU1 675 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 PRR23AA6NEV1 266 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 LRRC14BA6NHZ5 514 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 GFYI3L273 518 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 BTN3A1O00481 513 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 ZNF195O14628 629 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 KPNA5O15131 536 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 TAPBPO15533 448 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 LATO43561 262 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 NPHS1O60500 1241 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 ATG13O75143 517 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 SMIM24O75264 130 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 H2AFYO75367 372 aaKnown RBP5.89□□□□□ -1.47
SDC4P-201ENST00000453285 MATN4O95460 622 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 FTH1P02794 183 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 CHRNGP07510 517 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 HOXC4P09017 264 aaPredicted RBP5.89□□□□□ -1.47
SDC4P-201ENST00000453285 TPBGLP0DKB5 382 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 ENO3P13929 434 aaPredicted RBP5.89□□□□□ -1.47
SDC4P-201ENST00000453285 MAT2AP31153 395 aaKnown RBP5.89□□□□□ -1.47
SDC4P-201ENST00000453285 RGS4P49798 205 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 SF3A3Q12874 501 aaKnown RBP eCLIP5.89□□□□□ -1.47
SDC4P-201ENST00000453285 OVGP1Q12889 678 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 SGCGQ13326 291 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 RCN2Q14257 317 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 TGFBIQ15582 683 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 PHKG1Q16816 387 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 TTLL9Q3SXZ7 439 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 ARL13AQ5H913 290 aaPredicted RBP5.89□□□□□ -1.47
SDC4P-201ENST00000453285 ZNF678Q5SXM1 525 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 C6orf89Q6UWU4 347 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 NEK10Q6ZWH5 1172 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 RPS27LQ71UM5 84 aaKnown RBP5.89□□□□□ -1.47
SDC4P-201ENST00000453285 SPATA21Q7Z572 469 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 GPSM1Q86YR5 675 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 SLC22A9Q8IVM8 553 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 MYO1HQ8N1T3 1032 aa5.89□□□□□ -1.47
SDC4P-201ENST00000453285 LILRA3Q8N6C8 439 aaPredicted RBP5.89□□□□□ -1.47
SDC4P-201ENST00000453285 PTGR2Q8N8N7 351 aaPredicted RBP5.89□□□□□ -1.47
SDC4P-201ENST00000453285 OR2T34Q8NGX1 318 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms