RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 EBNA1BP2Q99848 306 aaKnown RBP13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 TRIM56Q9BRZ2 755 aaKnown RBP13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 LRRN3Q9H3W5 708 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 SARS2Q9NP81 518 aaKnown RBP13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 C20orf96Q9NUD7 363 aaPredicted RBP13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 MARCH4Q9P2E8 410 aaPredicted RBP13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 CPNE7Q9UBL6 633 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 GNPTGQ9UJJ9 305 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 CLCA2Q9UQC9 943 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 VPS9D1Q9Y2B5 631 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 PRSS21Q9Y6M0 314 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 TPRP12270 2363 aaKnown RBP13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 UBA6A0AVT1 1052 aaPredicted RBP13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 PRMT5O14744 637 aaPredicted RBP13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 PPM1DO15297 605 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 SGTAO43765 313 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 TCEA3O75764 348 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 XRCC1P18887 633 aaPredicted RBP13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 ARNTP27540 789 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 ARCN1P48444 511 aaKnown RBP13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 CCL7P80098 99 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 SYTL3Q4VX76 610 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 METRNLQ641Q3 311 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 DUPD1Q68J44 220 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 PTRHD1Q6GMV3 140 aaKnown RBP13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 RBM44Q6ZP01 1051 aaKnown RBP13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 FAM83HQ6ZRV2 1179 aaPredicted RBP13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 SPRED1Q7Z699 444 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 LRRC6Q86X45 466 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 LMNTD2Q8IXW0 634 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 AGGF1Q8N302 714 aaeCLIP13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 CEP112Q8N8E3 955 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 GPR150Q8NGU9 434 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 AHCYL2Q96HN2 611 aaKnown RBP13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 PWWP2AQ96N64 755 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 DEPDC7Q96QD5 511 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 GFM1Q96RP9 751 aaKnown RBP13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 TCF12Q99081 682 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 ZMYND15Q9H091 742 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 KCNK4Q9NYG8 393 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 SCHIP1Q9P0W5 487 aaPredicted RBP13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 RABGEF1Q9UJ41 708 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 PSMD13Q9UNM6 376 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 NEUROG3Q9Y4Z2 214 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 FAM169AQ9Y6X4 670 aa13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 MAP1BP46821 2468 aaKnown RBP13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 GOLGA4Q13439 2230 aaKnown RBP13.75□□□□□ -0.21
GTF3C3-206ENST00000448539 PLXNB3Q9ULL4 1909 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 ZCWPW2A0A1B0GU75 182 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 FAM149AA5PLN7 773 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 PRR19A6NJB7 356 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 OR52A4PA6NMU1 304 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 IFRD1O00458 451 aaPredicted RBP13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 BANF1O75531 89 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 BRAFP15056 766 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 OGNP20774 298 aaKnown RBP13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 ELK3P41970 407 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 EIF3BP55884 814 aaKnown RBP13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 CLDN6P56747 220 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 OR1D5P58170 312 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 SLC7A5Q01650 507 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 CAV1Q03135 178 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 PDIA2Q13087 525 aaKnown RBP13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 KRT33BQ14525 404 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 CRYMQ14894 314 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 AMZ1Q400G9 498 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 MSS51Q4VC12 460 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 SPANXN3Q5MJ09 141 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 HP1BP3Q5SSJ5 553 aaPredicted RBP13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 ZNF470Q6ECI4 717 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 CENPUQ71F23 418 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 ZNF438Q7Z4V0 828 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 RBM12BQ8IXT5 1001 aaKnown RBP13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 MMGT1Q8N4V1 131 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 OR10G6Q8NH81 332 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 ELMO1Q92556 727 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 CFAP36Q96G28 342 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 PANX3Q96QZ0 392 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 FAM167BQ9BTA0 163 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 LRRC1Q9BTT6 524 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 WWP1Q9H0M0 922 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 COG4Q9H9E3 785 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 EPB41L5Q9HCM4 733 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 POT1Q9NUX5 634 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 IL1RAPL1Q9NZN1 696 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 ZC3H7BQ9UGR2 993 aaKnown RBP13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 KLK13Q9UKR3 277 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 CHMP2BQ9UQN3 213 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 WDR37Q9Y2I8 494 aa13.74□□□□□ -0.21
GTF3C3-206ENST00000448539 USP24Q9UPU5 2620 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 LIN7AO14910 233 aaPredicted RBP13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 ITGB6P18564 788 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 SLC19A1P41440 591 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 PLTPP55058 493 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 UBE2IP63279 158 aaKnown RBP13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 PLOD1Q02809 727 aaPredicted RBP13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 TARDBPQ13148 414 aaKnown RBP eCLIP13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 RPA4Q13156 261 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms