RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 CCT8P50990 548 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 PPARDQ03181 441 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 SHBQ15464 509 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 KLHL38Q2WGJ6 581 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 KIAA0408Q6ZU52 694 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 CYS1Q717R9 158 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 PARGQ86W56 976 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 SLC26A11Q86WA9 606 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 LRRC6Q86X45 466 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 GALNT13Q8IUC8 556 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 HEXDCQ8WVB3 486 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 FAM136AQ96C01 138 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 NDNQ99608 321 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 CDC6Q99741 560 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 CCDC68Q9H2F9 335 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 TCEAL2Q9H3H9 227 aaPredicted RBP16.95■□□□□ 0.3
LIME1-202ENST00000444951 VPS18Q9P253 973 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 LHX6Q9UPM6 363 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 VPS9D1Q9Y2B5 631 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 ADAMTS20P59510 1910 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 SMIM23A6NLE4 172 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 IQCF5A8MTL0 148 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 DNAJC6O75061 913 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 TNFP01375 233 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 OR56A5P0C7T3 313 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 JUNDP17535 347 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 SAT1P21673 171 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 ZNF449Q6P9G9 518 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 PACS1Q6VY07 963 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 CHST15Q7LFX5 561 aaPredicted RBP16.94■□□□□ 0.3
LIME1-202ENST00000444951 TMPRSS7Q7RTY8 843 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 LRRTM4Q86VH4 590 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 GATAD2AQ86YP4 633 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 PHACTR4Q8IZ21 702 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 KRT222Q8N1A0 295 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 GPATCH11Q8N954 259 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 OR2W6PQ8NHA6 318 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 CPNE1Q99829 537 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 CCDC77Q9BR77 488 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 FUT8Q9BYC5 575 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 P2RY12Q9H244 342 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 SARS2Q9NP81 518 aaKnown RBP16.94■□□□□ 0.3
LIME1-202ENST00000444951 ARGLU1Q9NWB6 273 aaPredicted RBP16.94■□□□□ 0.3
LIME1-202ENST00000444951 KLF15Q9UIH9 416 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 GNPTGQ9UJJ9 305 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 PLEKHM1Q9Y4G2 1056 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 IKBKGQ9Y6K9 419 aa16.94■□□□□ 0.3
LIME1-202ENST00000444951 A0A1B0GTQ1 180 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 FAM149AA5PLN7 773 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 TNFRSF10CO14798 259 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 PCDHGA12O60330 932 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 NIPSNAP2O75323 286 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 IVLP07476 585 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 INHBAP08476 426 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 ACP5P13686 325 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 CTSEP14091 401 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 GP5P40197 560 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 MSH2P43246 934 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 GRK6P43250 576 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 CLDN6P56747 220 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 IFFO1Q0D2I5 559 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 NAB1Q13506 487 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 SUZ12Q15022 739 aaKnown RBP16.93■□□□□ 0.3
LIME1-202ENST00000444951 INSCQ1MX18 579 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 CCDC157Q569K6 752 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 CTSL3PQ5NE16 218 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 BEND6Q5SZJ8 279 aaPredicted RBP16.93■□□□□ 0.3
LIME1-202ENST00000444951 RBM20Q5T481 1227 aaKnown RBP16.93■□□□□ 0.3
LIME1-202ENST00000444951 ZNF549Q6P9A3 640 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 C19orf48Q6RUI8 117 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 NAPRTQ6XQN6 538 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 MREGQ8N565 214 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 ELMO2Q96JJ3 720 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 OR2M4Q96R27 311 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 PAFAH2Q99487 392 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 SLC13A1Q9BZW2 595 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 DNAJC16Q9Y2G8 782 aa16.93■□□□□ 0.3
LIME1-202ENST00000444951 ARID1BQ8NFD5 2236 aaPredicted RBP16.92■□□□□ 0.3
LIME1-202ENST00000444951 KMOO15229 486 aa16.92■□□□□ 0.3
LIME1-202ENST00000444951 SGTAO43765 313 aa16.92■□□□□ 0.3
LIME1-202ENST00000444951 SDC3O75056 442 aa16.92■□□□□ 0.3
LIME1-202ENST00000444951 POP7O75817 140 aaKnown RBP16.92■□□□□ 0.3
LIME1-202ENST00000444951 AP2A2O94973 939 aa16.92■□□□□ 0.3
LIME1-202ENST00000444951 PKMP14618 531 aaKnown RBP16.92■□□□□ 0.3
LIME1-202ENST00000444951 CHRM3P20309 590 aa16.92■□□□□ 0.3
LIME1-202ENST00000444951 RPS3P23396 243 aaKnown RBP eCLIP16.92■□□□□ 0.3
LIME1-202ENST00000444951 SLCO1A2P46721 670 aa16.92■□□□□ 0.3
LIME1-202ENST00000444951 HK3P52790 923 aa16.92■□□□□ 0.3
LIME1-202ENST00000444951 CSE1LP55060 971 aaKnown RBP16.92■□□□□ 0.3
LIME1-202ENST00000444951 C1orf61Q13536 156 aa16.92■□□□□ 0.3
LIME1-202ENST00000444951 BMPR2Q13873 1038 aa16.92■□□□□ 0.3
LIME1-202ENST00000444951 PYCR3Q53H96 274 aa16.92■□□□□ 0.3
LIME1-202ENST00000444951 GRTP1Q5TC63 336 aa16.92■□□□□ 0.3
LIME1-202ENST00000444951 FBXO38Q6PIJ6 1188 aa16.92■□□□□ 0.3
LIME1-202ENST00000444951 ZC3HC1Q86WB0 502 aaKnown RBP16.92■□□□□ 0.3
LIME1-202ENST00000444951 ZNF547Q8IVP9 402 aa16.92■□□□□ 0.3
LIME1-202ENST00000444951 SPNS2Q8IVW8 549 aa16.92■□□□□ 0.3
LIME1-202ENST00000444951 LKAAEAR1Q8TD35 194 aa16.92■□□□□ 0.3
LIME1-202ENST00000444951 ZNF514Q96K75 400 aaPredicted RBP16.92■□□□□ 0.3
LIME1-202ENST00000444951 BIRC8Q96P09 236 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms