RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 DGCR6Q14129 220 aa18.7■□□□□ 0.58
PAXBP1-204ENST00000443785 ADRM1Q16186 407 aa18.7■□□□□ 0.58
PAXBP1-204ENST00000443785 CPSF6Q16630 551 aaKnown RBP eCLIP18.7■□□□□ 0.58
PAXBP1-204ENST00000443785 PERM1Q5SV97 790 aa18.7■□□□□ 0.58
PAXBP1-204ENST00000443785 RNF219Q5W0B1 726 aaPredicted RBP18.7■□□□□ 0.58
PAXBP1-204ENST00000443785 CD200R1Q8TD46 325 aa18.7■□□□□ 0.58
PAXBP1-204ENST00000443785 TANKQ92844 425 aa18.7■□□□□ 0.58
PAXBP1-204ENST00000443785 RHNO1Q9BSD3 238 aa18.7■□□□□ 0.58
PAXBP1-204ENST00000443785 FBXO44Q9H4M3 255 aa18.7■□□□□ 0.58
PAXBP1-204ENST00000443785 RRAGCQ9HB90 399 aa18.7■□□□□ 0.58
PAXBP1-204ENST00000443785 MITFO75030 526 aaPredicted RBP18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 BMP10O95393 424 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 TSPAN12O95859 305 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 FLT3LGP49771 235 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 CASP9P55211 416 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 MGAT3Q09327 533 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 GALNT1Q10472 559 aaPredicted RBP18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 BNIP2Q12982 314 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 SF1Q15637 639 aaKnown RBP18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 SPANXN4Q5MJ08 99 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 RTP2Q5QGT7 225 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 MRPL10Q7Z7H8 261 aaKnown RBP18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 OR56A4Q8NGH8 313 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 HM13Q8TCT9 377 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 ACTL8Q9H568 366 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 ANGPTL3Q9Y5C1 460 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 MYO7AQ13402 2215 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 DUSP11O75319 330 aaKnown RBP18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 KLKB1P03952 638 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 FAM189BP81408 668 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 SPIDRQ14159 915 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 CST9Q5W186 159 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 CCDC81Q6ZN84 652 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 PYCR2Q96C36 320 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 GPR63Q9BZJ6 419 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 CIPCQ9C0C6 399 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 LHPPQ9H008 270 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 SPC25Q9HBM1 224 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 TLR8Q9NR97 1041 aaKnown RBP18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 LATS2Q9NRM7 1088 aa18.69■□□□□ 0.58
PAXBP1-204ENST00000443785 LCHNA4D1U4 455 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 PRKD3O94806 890 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 CST1P01037 141 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 UROSP10746 265 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 DNAJB1P25685 340 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 MZF1P28698 734 aaPredicted RBP18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 ZNF140P52738 457 aaPredicted RBP18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 TRIP4Q15650 581 aaPredicted RBP18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 PHKG1Q16816 387 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 INTS11Q5TA45 600 aaKnown RBP18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 PTRHD1Q6GMV3 140 aaKnown RBP18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 BORAQ6PGQ7 559 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 HACD2Q6Y1H2 254 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 CCDC117Q8IWD4 279 aaPredicted RBP18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 CARNMT1Q8N4J0 409 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 TEX26Q8N6G2 289 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 FNDC8Q8TC99 324 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 PNPT1Q8TCS8 783 aaKnown RBP18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 CCDC138Q96M89 665 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 ADGRE2Q9UHX3 823 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 PCDHB8Q9UN66 801 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 H0Y858 1186 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 RHOCP08134 193 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 RPS17P08708 135 aaKnown RBP18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 ARSFP54793 590 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 SH3BGRP55822 239 aaPredicted RBP18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 NFKB2Q00653 900 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 SIM2Q14190 667 aaPredicted RBP18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 GOLGA7Q7Z5G4 137 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 PATL1Q86TB9 770 aaKnown RBP18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 SLC15A4Q8N697 577 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 CNIH3Q8TBE1 160 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 FAM162AQ96A26 154 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 EID2BQ96D98 161 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 DERL2Q9GZP9 239 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 PCDHGA8Q9Y5G5 932 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 SLC30A1Q9Y6M5 507 aa18.68■□□□□ 0.58
PAXBP1-204ENST00000443785 MLYCDO95822 493 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 BMXP51813 675 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 ERVK-8P63133 956 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 CRHR2Q13324 411 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 MBTPS1Q14703 1052 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 RASAL3Q86YV0 1011 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 MFSD2AQ8NA29 543 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 SNX19Q92543 992 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.67■□□□□ 0.583e-10■■■■■ 47.1
PAXBP1-204ENST00000443785 GLT1D1Q96MS3 346 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 TSPAN18Q96SJ8 248 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 BARD1Q99728 777 aaKnown RBP18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 PADI4Q9UM07 663 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 PCDHGA11Q9Y5H2 935 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 PRSS21Q9Y6M0 314 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 ATP6V1G1O75348 118 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 NUP107P57740 925 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 CAP1Q01518 475 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 CHRNB3Q05901 458 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 TMEM179BQ7Z7N9 219 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 TSSK3Q96PN8 268 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 CSF3RQ99062 836 aa18.67■□□□□ 0.58
PAXBP1-204ENST00000443785 CGREF1Q99674 301 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms