RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ZCWPW2A0A1B0GU75 182 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 A0A1W2PQM1 296 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 FAM149AA5PLN7 773 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 LILRA5A6NI73 299 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 PRMT5O14744 637 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-206ENST00000439717 LIN7AO14910 233 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-206ENST00000439717 B4GAT1O43505 415 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 OR1I1O60431 355 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 CSO75390 466 aaKnown RBP11.58□□□□□ -0.56
HSPG2-206ENST00000439717 NDUFS3O75489 264 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 VIPP01282 170 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 PGAM1P18669 254 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 OGNP20774 298 aaKnown RBP11.58□□□□□ -0.56
HSPG2-206ENST00000439717 ALDH4A1P30038 563 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 SLC19A1P41440 591 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 RPL21P46778 160 aaKnown RBP11.58□□□□□ -0.56
HSPG2-206ENST00000439717 EPHA4P54764 986 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 ARL4CP56559 192 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 CLDN6P56747 220 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 OR1D5P58170 312 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 PLOD1Q02809 727 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-206ENST00000439717 CALCOCO2Q13137 446 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 RPA4Q13156 261 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 CBLBQ13191 982 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 CLCA4Q14CN2 919 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 HIF1AQ16665 826 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 LONRF1Q17RB8 773 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 TYSND1Q2T9J0 566 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 ZNF658BQ4V348 819 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-206ENST00000439717 NEPROQ6NW34 567 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 OTUD6BQ8N6M0 293 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 MNS1Q8NEH6 495 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 NAT14Q8WUY8 206 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 CXorf40BQ96DE9 158 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 EBNA1BP2Q99848 306 aaKnown RBP11.58□□□□□ -0.56
HSPG2-206ENST00000439717 DPYSL5Q9BPU6 564 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 CARD6Q9BX69 1037 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 SYNDIG1Q9H7V2 258 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 COG4Q9H9E3 785 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 KCNK4Q9NYG8 393 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 ZNF624Q9P2J8 865 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-206ENST00000439717 VPS9D1Q9Y2B5 631 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 WDR37Q9Y2I8 494 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 SNX24Q9Y343 169 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 MRFAP1Q9Y605 127 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 PRSS21Q9Y6M0 314 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 FAM169AQ9Y6X4 670 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 SPEGQ15772 3267 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 ARHGEF17Q96PE2 2063 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-206ENST00000439717 PTPRBP23467 1997 aa11.58□□□□□ -0.56
HSPG2-206ENST00000439717 IGHV1OR21-1A0A087WYE8 117 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 D6RAR5 112 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 TP73O15350 636 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 CPNE6O95741 557 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 SLC35G4P0C7Q5 338 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 RPS3P23396 243 aaKnown RBP eCLIP11.57□□□□□ -0.56
HSPG2-206ENST00000439717 CD151P48509 253 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 ADARP55265 1226 aaKnown RBP11.57□□□□□ -0.56
HSPG2-206ENST00000439717 CAMK2BQ13554 666 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 THOC5Q13769 683 aaKnown RBP11.57□□□□□ -0.56
HSPG2-206ENST00000439717 RPE65Q16518 533 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 ISXQ2M1V0 245 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 BBS9Q3SYG4 887 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 MSS51Q4VC12 460 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 SPANXN3Q5MJ09 141 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 DUPD1Q68J44 220 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 CAPRIN2Q6IMN6 1127 aaKnown RBP11.57□□□□□ -0.56
HSPG2-206ENST00000439717 XKR5Q6UX68 686 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 TMEM26Q6ZUK4 368 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 LDB1Q86U70 411 aaPredicted RBP11.57□□□□□ -0.56
HSPG2-206ENST00000439717 PIM3Q86V86 326 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.57□□□□□ -0.56
HSPG2-206ENST00000439717 OR10G6Q8NH81 332 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 GABPB2Q8TAK5 448 aaPredicted RBP11.57□□□□□ -0.56
HSPG2-206ENST00000439717 CALML6Q8TD86 181 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 ZFPM2Q8WW38 1151 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 GATA6Q92908 595 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 TMEM74Q96NL1 305 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 TRIM56Q9BRZ2 755 aaKnown RBP11.57□□□□□ -0.56
HSPG2-206ENST00000439717 NRSN2Q9GZP1 204 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 WWP1Q9H0M0 922 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 P2RY12Q9H244 342 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 SLC40A1Q9NP59 571 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 C20orf96Q9NUD7 363 aaPredicted RBP11.57□□□□□ -0.56
HSPG2-206ENST00000439717 INTS10Q9NVR2 710 aaKnown RBP11.57□□□□□ -0.56
HSPG2-206ENST00000439717 GNPTGQ9UJJ9 305 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 PSMD13Q9UNM6 376 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 HEBP2Q9Y5Z4 205 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 TEX264Q9Y6I9 313 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 GOLGA4Q13439 2230 aaKnown RBP11.57□□□□□ -0.56
HSPG2-206ENST00000439717 SPTBN2O15020 2390 aa11.57□□□□□ -0.56
HSPG2-206ENST00000439717 NCOR2Q9Y618 2525 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 OR52A4PA6NMU1 304 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 GOLGA8KD6RF30 607 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 H3BMM5 538 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 GOLGA8TH3BQL2 631 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 DUX1O43812 170 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 MTHFD1P11586 935 aaKnown RBP11.56□□□□□ -0.56
HSPG2-206ENST00000439717 NDUFS1P28331 727 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 CD1CP29017 333 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms