RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 GPSM3Q9Y4H4 160 aa9.72□□□□□ -0.85
AC004448.3-201ENST00000435953 PCYT1BQ9Y5K3 369 aaPredicted RBP9.72□□□□□ -0.85
AC004448.3-201ENST00000435953 SPTY2D1-AS1A0A0U1RR47 76 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 SLC5A10A0PJK1 596 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 KLHL33A6NCF5 533 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 BCAT2O15382 392 aaPredicted RBP9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 PRPF4O43172 522 aaKnown RBP eCLIP9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 SLCO2B1O94956 709 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 TNFP01375 233 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 LTA4HP09960 611 aaKnown RBP9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 CBSLP0DN79 551 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 ITPKAP23677 461 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 CBSP35520 551 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 SLC18A1P54219 525 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 IRF9Q00978 393 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 PLOD1Q02809 727 aaPredicted RBP9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 HSPA14Q0VDF9 509 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 DLG1Q12959 904 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 EIF2B5Q13144 721 aaKnown RBP9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 FZD2Q14332 565 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 GBX1Q14549 363 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 FAM83EQ2M2I3 478 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 ZNF658BQ4V348 819 aaPredicted RBP9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 ACSBG2Q5FVE4 666 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 AGAP9Q5VTM2 703 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 LYSMD4Q5XG99 296 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 CRTC3Q6UUV7 619 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 CDHR3Q6ZTQ4 885 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 GALNT13Q8IUC8 556 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 CPNE9Q8IYJ1 553 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 CENPLQ8N0S6 344 aaPredicted RBP9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 SLC22A18ASQ8N1D0 253 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 KCTD4Q8WVF5 259 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 SKA1Q96BD8 255 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 GPR78Q96P69 363 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 CARS2Q9HA77 564 aaKnown RBP9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 NMRAL1Q9HBL8 299 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 CYP4F12Q9HCS2 524 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 FGF22Q9HCT0 170 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 MRPL40Q9NQ50 206 aaKnown RBP9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 TM7SF3Q9NS93 570 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 IGSF5Q9NSI5 407 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 ZNF358Q9NW07 568 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 MKS1Q9NXB0 559 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 GULP1Q9UBP9 304 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 KLQ9UEF7 1012 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 SMG5Q9UPR3 1016 aaKnown RBP9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 PLLPQ9Y342 182 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 PCDHGA2Q9Y5H1 932 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 DGKBQ9Y6T7 804 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 ZDBF2Q9HCK1 2354 aa9.71□□□□□ -0.86
AC004448.3-201ENST00000435953 NUMA1Q14980 2115 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 PRSS38A1L453 326 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 PRR5-ARHGAP8B1AHC4 643 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 EIF3FO00303 357 aaPredicted RBP9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 LIN7AO14910 233 aaPredicted RBP9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 VILLO15195 856 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 GLRA3O75311 464 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 TSPAN12O95859 305 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 TOP3BO95985 862 aaKnown RBP9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 APOA4P06727 396 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 ENO3P13929 434 aaPredicted RBP9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 GNSP15586 552 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 CD1DP15813 335 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 ZNF37AP17032 561 aaPredicted RBP9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 PBLDP30039 288 aaPredicted RBP9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 HPDP32754 393 aaPredicted RBP9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 RPA3P35244 121 aaPredicted RBP9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 GNPDA1P46926 289 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 CSNK1EP49674 416 aaKnown RBP9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 RGS4P49798 205 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 AFF3P51826 1226 aaKnown RBP9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 NXPH1P58417 271 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 ATP6V0D1P61421 351 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 PPP2R2AP63151 447 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 PPARDQ03181 441 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 RPA4Q13156 261 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 SIM2Q14190 667 aaPredicted RBP9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 CSHL1Q14406 222 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 ACAP2Q15057 778 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 ALG11Q2TAA5 492 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 TSNAXIP1Q2TAA8 658 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 METRNLQ641Q3 311 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 C16orf46Q6P387 395 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 CHST15Q7LFX5 561 aaPredicted RBP9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 RD3Q7Z3Z2 195 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 ISCA2Q86U28 154 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 SPATS2Q86XZ4 545 aaKnown RBP9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 HID1Q8IV36 788 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 OXR1Q8N573 874 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 HM13Q8TCT9 377 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 TCP10LQ8TDR4 215 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 DENND1AQ8TEH3 1009 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 LINGO1Q96FE5 620 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 APOPT1Q96IL0 206 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 TSNARE1Q96NA8 513 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 TIMM29Q9BSF4 260 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 DERL2Q9GZP9 239 aa9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 TFB2MQ9H5Q4 396 aaKnown RBP9.7□□□□□ -0.86
AC004448.3-201ENST00000435953 KLC4Q9NSK0 619 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms