RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.34□□□□□ -0.27
PTPN7-203ENST00000435759 LDLRAP1Q5SW96 308 aa13.34□□□□□ -0.27
PTPN7-203ENST00000435759 GLT6D1Q7Z4J2 308 aa13.34□□□□□ -0.27
PTPN7-203ENST00000435759 PPP1R3BQ86XI6 285 aa13.34□□□□□ -0.27
PTPN7-203ENST00000435759 RBM12BQ8IXT5 1001 aaKnown RBP13.34□□□□□ -0.27
PTPN7-203ENST00000435759 KATNAL2Q8IYT4 538 aa13.34□□□□□ -0.27
PTPN7-203ENST00000435759 LILRA3Q8N6C8 439 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-203ENST00000435759 DDHD1Q8NEL9 900 aa13.34□□□□□ -0.27
PTPN7-203ENST00000435759 STAMBPL1Q96FJ0 436 aa13.34□□□□□ -0.27
PTPN7-203ENST00000435759 FAM96AQ9H5X1 160 aa13.34□□□□□ -0.27
PTPN7-203ENST00000435759 LHX9Q9NQ69 397 aa13.34□□□□□ -0.27
PTPN7-203ENST00000435759 HRASLS2Q9NWW9 162 aa13.34□□□□□ -0.27
PTPN7-203ENST00000435759 TLK1Q9UKI8 766 aa13.34□□□□□ -0.27
PTPN7-203ENST00000435759 DNMT3AQ9Y6K1 912 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-203ENST00000435759 PTPN13Q12923 2485 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 AKR1B15C9JRZ8 316 aaPredicted RBP13.33□□□□□ -0.28
PTPN7-203ENST00000435759 STX7O15400 261 aaKnown RBP13.33□□□□□ -0.28
PTPN7-203ENST00000435759 PSTPIP1O43586 416 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 CREG1O75629 220 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 DNAJB5O75953 348 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 POLBP06746 335 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 RPS18P62269 152 aaKnown RBP13.33□□□□□ -0.28
PTPN7-203ENST00000435759 DNASE1L3Q13609 305 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 UBAP2LQ14157 1087 aaKnown RBP13.33□□□□□ -0.28
PTPN7-203ENST00000435759 LACTB2Q53H82 288 aaPredicted RBP13.33□□□□□ -0.28
PTPN7-203ENST00000435759 TFDP3Q5H9I0 405 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 PRAMEF17Q5VTA0 474 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 LCN10Q6JVE6 187 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 RANBP10Q6VN20 620 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 DAAM2Q86T65 1068 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 SIDT2Q8NBJ9 832 aaKnown RBP13.33□□□□□ -0.28
PTPN7-203ENST00000435759 SLC38A9Q8NBW4 561 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 OR4K2Q8NGD2 314 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 QKIQ96PU8 341 aaKnown RBP eCLIP13.33□□□□□ -0.28
PTPN7-203ENST00000435759 FAM118BQ9BPY3 351 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 FICDQ9BVA6 458 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 TWSG1Q9GZX9 223 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 IMP3Q9NV31 184 aaKnown RBP13.33□□□□□ -0.28
PTPN7-203ENST00000435759 FAM8A1Q9UBU6 413 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 RSPH14Q9UHP6 348 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 ANAPC2Q9UJX6 822 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 PKP3Q9Y446 797 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 PCDHB3Q9Y5E6 796 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 PCDHA13Q9Y5I0 950 aa13.33□□□□□ -0.28
PTPN7-203ENST00000435759 OR6C74A6NCV1 312 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 RCCD1A6NED2 376 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 OR5K3A6NET4 321 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 MGAT4DA6NG13 374 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 H7C0C1 242 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 MTSS1O43312 755 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 TPM1P09493 284 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 MTHFD1P11586 935 aaKnown RBP13.32□□□□□ -0.28
PTPN7-203ENST00000435759 HLA-DPA1P20036 260 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 MSH3P20585 1137 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 ADRA1AP35348 466 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 ATP5OP48047 213 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 HADHBP55084 474 aaKnown RBP13.32□□□□□ -0.28
PTPN7-203ENST00000435759 MLLT10P55197 1068 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 TMPRSS15P98073 1019 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 XIAPP98170 497 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 MPP3Q13368 585 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 TUBB3Q13509 450 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 GPR19Q15760 415 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 FAM69BQ5VUD6 431 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 ZDHHC20Q5W0Z9 365 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 CFAP206Q8IYR0 622 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 TC2NQ8N9U0 490 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 UBXN4Q92575 508 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 VAT1Q99536 393 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 TRIM55Q9BYV6 548 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 ASB8Q9H765 288 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 PDE7BQ9NP56 450 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.32□□□□□ -0.28
PTPN7-203ENST00000435759 HACD3Q9P035 362 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 FKBPLQ9UIM3 349 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 TRHDEQ9UKU6 1024 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 RARRES3Q9UL19 164 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 PCDHGA6Q9Y5G7 932 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 DUSP10Q9Y6W6 482 aa13.32□□□□□ -0.28
PTPN7-203ENST00000435759 LRRK2Q5S007 2527 aa13.31□□□□□ -0.28
PTPN7-203ENST00000435759 UBA6A0AVT1 1052 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-203ENST00000435759 CCL22O00626 93 aa13.31□□□□□ -0.28
PTPN7-203ENST00000435759 SRP72O76094 671 aaKnown RBP13.31□□□□□ -0.28
PTPN7-203ENST00000435759 PRAMEF1O95521 474 aa13.31□□□□□ -0.28
PTPN7-203ENST00000435759 LPOP22079 712 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-203ENST00000435759 CDKN1CP49918 316 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-203ENST00000435759 KPNA2P52292 529 aaKnown RBP13.31□□□□□ -0.28
PTPN7-203ENST00000435759 XRCC4Q13426 336 aa13.31□□□□□ -0.28
PTPN7-203ENST00000435759 LAMB3Q13751 1172 aa13.31□□□□□ -0.28
PTPN7-203ENST00000435759 SEPT6Q14141 434 aa13.31□□□□□ -0.28
PTPN7-203ENST00000435759 SPARCL1Q14515 664 aa13.31□□□□□ -0.28
PTPN7-203ENST00000435759 PLCL1Q15111 1095 aa13.31□□□□□ -0.28
PTPN7-203ENST00000435759 DNTTIP2Q5QJE6 756 aaKnown RBP13.31□□□□□ -0.28
PTPN7-203ENST00000435759 CAPRIN2Q6IMN6 1127 aaKnown RBP13.31□□□□□ -0.28
PTPN7-203ENST00000435759 DENND5AQ6IQ26 1287 aa13.31□□□□□ -0.28
PTPN7-203ENST00000435759 AADACL2Q6P093 401 aa13.31□□□□□ -0.28
PTPN7-203ENST00000435759 ASB18Q6ZVZ8 466 aa13.31□□□□□ -0.28
PTPN7-203ENST00000435759 BBS12Q6ZW61 710 aa13.31□□□□□ -0.28
PTPN7-203ENST00000435759 CCDC50Q8IVM0 306 aa13.31□□□□□ -0.28
PTPN7-203ENST00000435759 D2HGDHQ8N465 521 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms