RNA–Protein interactions for RNA: ENST00000434651.6

HLA-DQB1-205, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,642 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-205ENST00000434651 LVRNQ6Q4G3 990 aa14.81□□□□□ -0.04
HLA-DQB1-205ENST00000434651 EFL1Q7Z2Z2 1120 aaKnown RBP14.81□□□□□ -0.04
HLA-DQB1-205ENST00000434651 KCNMB4Q86W47 210 aa14.81□□□□□ -0.04
HLA-DQB1-205ENST00000434651 C17orf82Q86X59 251 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB1-205ENST00000434651 GSPT2Q8IYD1 628 aaKnown RBP14.81□□□□□ -0.04
HLA-DQB1-205ENST00000434651 ARL10Q8N8L6 244 aa14.81□□□□□ -0.04
HLA-DQB1-205ENST00000434651 Q8N9G6 341 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB1-205ENST00000434651 DMXL2Q8TDJ6 3036 aa14.81□□□□□ -0.04
HLA-DQB1-205ENST00000434651 JPH3Q8WXH2 748 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB1-205ENST00000434651 LPGAT1Q92604 370 aa14.81□□□□□ -0.04
HLA-DQB1-205ENST00000434651 TIMM29Q9BSF4 260 aa14.81□□□□□ -0.04
HLA-DQB1-205ENST00000434651 DUSP23Q9BVJ7 150 aa14.81□□□□□ -0.04
HLA-DQB1-205ENST00000434651 ZCCHC2Q9C0B9 1178 aaKnown RBP14.81□□□□□ -0.04
HLA-DQB1-205ENST00000434651 PSAT1Q9Y617 370 aa14.81□□□□□ -0.04
HLA-DQB1-205ENST00000434651 PTPRBP23467 1997 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 COL27A1Q8IZC6 1860 aaPredicted RBP14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 EME2A4GXA9 379 aaPredicted RBP14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 PDZK1P1A8MUH7 402 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 GPR89AB7ZAQ6 455 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 NIPSNAP2O75323 286 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 GPR89BP0CG08 455 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 PMLP29590 882 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 CCR7P32248 378 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 ITIH4Q14624 930 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 TYSND1Q2T9J0 566 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 C14orf28Q4W4Y0 310 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 STEAP4Q687X5 459 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 IYDQ6PHW0 289 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 PACS1Q6VY07 963 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 DGLUCYQ7Z3D6 616 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 GLRX5Q86SX6 157 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 VRK3Q8IV63 474 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 SFRP1Q8N474 314 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 CHCHD4Q8N4Q1 142 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 BBOF1Q8ND07 529 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 GPR150Q8NGU9 434 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 OR2L2Q8NH16 312 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 IFI44Q8TCB0 444 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 SCG3Q8WXD2 468 aaKnown RBP14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 CCDC74AQ96AQ1 378 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 SLC30A3Q99726 388 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 CDC6Q99741 560 aa14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 V9GYY5 206 aaPredicted RBP14.8□□□□□ -0.04
HLA-DQB1-205ENST00000434651 FAM149AA5PLN7 773 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 MGAT4DA6NG13 374 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 CXorf49A8MYA2 514 aaPredicted RBP14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 AGRPO00253 132 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 NDUFS3O75489 264 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 TRIM16O95361 564 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 MYBL2P10244 700 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 RALBP11234 206 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 F3P13726 295 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 ACP1P24666 158 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 SLC19A1P41440 591 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 CLCNKAP51800 687 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 THOC5Q13769 683 aaKnown RBP14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 NR0B2Q15466 257 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 INAVAQ3KP66 663 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 SPANXN3Q5MJ09 141 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 TEX35Q5T0J7 233 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 METRNLQ641Q3 311 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 CERS6Q6ZMG9 384 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 TMPRSS9Q7Z410 1059 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 ACVR1CQ8NER5 493 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 CERS2Q96G23 380 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 INSM2Q96T92 566 aaPredicted RBP14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 CCM2Q9BSQ5 444 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 WWP1Q9H0M0 922 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 PPANQ9NQ55 473 aaKnown RBP14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 LRIT1Q9P2V4 623 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 TSR3Q9UJK0 312 aaKnown RBP14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 NFU1Q9UMS0 254 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 MED16Q9Y2X0 877 aa14.79□□□□□ -0.04
HLA-DQB1-205ENST00000434651 MED19A0JLT2 244 aaPredicted RBP14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 CFAP99D6REC4 459 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 SMAPO00193 183 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 PRMT5O14744 637 aaPredicted RBP14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 B4GAT1O43505 415 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 C1QAP02745 245 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 AHSGP02765 367 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 PAMP19021 973 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 SDHBP21912 280 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 TTPAP49638 278 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 OR1D5P58170 312 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 BOP1Q14137 746 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 TEDDM1Q5T9Z0 273 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 NKAIN2Q5VXU1 208 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 MRNIPQ6NTE8 343 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 SDR16C5Q8N3Y7 309 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 PYROXD1Q8WU10 500 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 ELMO1Q92556 727 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 LINC00615Q96LM1 132 aaPredicted RBP14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 RMDN2Q96LZ7 410 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 CCDC3Q9BQI4 270 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 LRRC4CQ9HCJ2 640 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 FBXO5Q9UKT4 447 aa14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 RUVBL2Q9Y230 463 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB1-205ENST00000434651 A0A1W2PQM1 296 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms