RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 HALP42357 657 aa18.23■□□□□ 0.51
DDR1-236ENST00000431373 HHEXQ03014 270 aa18.23■□□□□ 0.51
DDR1-236ENST00000431373 CAV1Q03135 178 aa18.23■□□□□ 0.51
DDR1-236ENST00000431373 PDIA2Q13087 525 aaKnown RBP18.23■□□□□ 0.51
DDR1-236ENST00000431373 CBLBQ13191 982 aa18.23■□□□□ 0.51
DDR1-236ENST00000431373 NR1D2Q14995 579 aa18.23■□□□□ 0.51
DDR1-236ENST00000431373 HP1BP3Q5SSJ5 553 aaPredicted RBP18.23■□□□□ 0.51
DDR1-236ENST00000431373 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.23■□□□□ 0.51
DDR1-236ENST00000431373 RNF187Q5TA31 235 aaPredicted RBP18.23■□□□□ 0.51
DDR1-236ENST00000431373 IGDCC3Q8IVU1 814 aa18.23■□□□□ 0.51
DDR1-236ENST00000431373 CFAP206Q8IYR0 622 aa18.23■□□□□ 0.51
DDR1-236ENST00000431373 NOA1Q8NC60 698 aaKnown RBP18.23■□□□□ 0.51
DDR1-236ENST00000431373 WDR48Q8TAF3 677 aa18.23■□□□□ 0.51
DDR1-236ENST00000431373 CALML6Q8TD86 181 aa18.23■□□□□ 0.51
DDR1-236ENST00000431373 ART4Q93070 314 aa18.23■□□□□ 0.51
DDR1-236ENST00000431373 SCHIP1Q9P0W5 487 aaPredicted RBP18.23■□□□□ 0.51
DDR1-236ENST00000431373 CPNE7Q9UBL6 633 aa18.23■□□□□ 0.51
DDR1-236ENST00000431373 PSMD13Q9UNM6 376 aa18.23■□□□□ 0.51
DDR1-236ENST00000431373 WASF3Q9UPY6 502 aa18.23■□□□□ 0.51
DDR1-236ENST00000431373 WDR37Q9Y2I8 494 aa18.23■□□□□ 0.51
DDR1-236ENST00000431373 UBA6A0AVT1 1052 aaPredicted RBP18.22■□□□□ 0.51
DDR1-236ENST00000431373 E7ESA3 106 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 ZW10O43264 779 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 XRCC1P18887 633 aaPredicted RBP18.22■□□□□ 0.51
DDR1-236ENST00000431373 GPR3P46089 330 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 PLTPP55058 493 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 UBE2IP63279 158 aaKnown RBP18.22■□□□□ 0.51
DDR1-236ENST00000431373 ZNF658BQ4V348 819 aaPredicted RBP18.22■□□□□ 0.51
DDR1-236ENST00000431373 HES3Q5TGS1 186 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 ZNF470Q6ECI4 717 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 XKR5Q6UX68 686 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 CENPUQ71F23 418 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 TMPRSS7Q7RTY8 843 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 SPRED1Q7Z699 444 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 TMPRSS12Q86WS5 348 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 LRRC6Q86X45 466 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 CILP2Q8IUL8 1156 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 TRIM48Q8IWZ4 208 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 LMNTD2Q8IXW0 634 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 Q8N9G6 341 aaPredicted RBP18.22■□□□□ 0.51
DDR1-236ENST00000431373 CFAP36Q96G28 342 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 WDR83Q9BRX9 315 aaKnown RBP18.22■□□□□ 0.51
DDR1-236ENST00000431373 FAM167BQ9BTA0 163 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 TSSK1BQ9BXA7 367 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 COG4Q9H9E3 785 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 ZC3H7BQ9UGR2 993 aaKnown RBP18.22■□□□□ 0.51
DDR1-236ENST00000431373 GNPTGQ9UJJ9 305 aa18.22■□□□□ 0.51
DDR1-236ENST00000431373 OR52A4PA6NMU1 304 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 SLC35G4P0C7Q5 338 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 RPS3P23396 243 aaKnown RBP eCLIP18.21■□□□□ 0.51
DDR1-236ENST00000431373 SLC19A1P41440 591 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 CLDN6P56747 220 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 CCL7P80098 99 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 CLCA4Q14CN2 919 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 GLE1Q53GS7 698 aaKnown RBP18.21■□□□□ 0.51
DDR1-236ENST00000431373 PTRHD1Q6GMV3 140 aaKnown RBP18.21■□□□□ 0.51
DDR1-236ENST00000431373 ZNF449Q6P9G9 518 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 UNC5AQ6ZN44 842 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 KCNMB4Q86W47 210 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 ANKMY2Q8IV38 441 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 LILRA3Q8N6C8 439 aaPredicted RBP18.21■□□□□ 0.51
DDR1-236ENST00000431373 ELMO1Q92556 727 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 LPGAT1Q92604 370 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 SH3KBP1Q96B97 665 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 CXorf40BQ96DE9 158 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 SCNM1Q9BWG6 230 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 CARD6Q9BX69 1037 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 WWP1Q9H0M0 922 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 P2RY12Q9H244 342 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 LRRN3Q9H3W5 708 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 SYNDIG1Q9H7V2 258 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 POT1Q9NUX5 634 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 INTS10Q9NVR2 710 aaKnown RBP18.21■□□□□ 0.51
DDR1-236ENST00000431373 ZNF624Q9P2J8 865 aaPredicted RBP18.21■□□□□ 0.51
DDR1-236ENST00000431373 VPS9D1Q9Y2B5 631 aa18.21■□□□□ 0.51
DDR1-236ENST00000431373 NCOR2Q9Y618 2525 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 NTN3O00634 580 aaPredicted RBP18.2■□□□□ 0.5
DDR1-236ENST00000431373 LIN7AO14910 233 aaPredicted RBP18.2■□□□□ 0.5
DDR1-236ENST00000431373 EIF3HO15372 352 aaKnown RBP eCLIP18.2■□□□□ 0.55e-6■■■□□ 14.9
DDR1-236ENST00000431373 MT-CO3P00414 261 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 VIPP01282 170 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 RPLP0P05388 317 aaKnown RBP18.2■□□□□ 0.5
DDR1-236ENST00000431373 SPINK2P20155 84 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 ALDH4A1P30038 563 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 EIF3BP55884 814 aaKnown RBP18.2■□□□□ 0.5
DDR1-236ENST00000431373 OR1D5P58170 312 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 SHC2P98077 582 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 FOXK2Q01167 660 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 GUCY2DQ02846 1103 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 RPA4Q13156 261 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 SPIDRQ14159 915 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 FASTKD3Q14CZ7 662 aaKnown RBP18.2■□□□□ 0.5
DDR1-236ENST00000431373 TRADDQ15628 312 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 RPE65Q16518 533 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 HSP90AA5PQ58FG0 334 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 CDCP2Q5VXM1 449 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 STEAP4Q687X5 459 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 UNC5BQ8IZJ1 945 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 FBXO36Q8NEA4 188 aa18.2■□□□□ 0.5
DDR1-236ENST00000431373 GABPB2Q8TAK5 448 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms