RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 BBS5Q8N3I7 341 aa7.84□□□□□ -1.15
CSTF1-203ENST00000428552 TRAM1L1Q8N609 369 aa7.84□□□□□ -1.15
CSTF1-203ENST00000428552 GRHL3Q8TE85 626 aa7.84□□□□□ -1.15
CSTF1-203ENST00000428552 LRRN4Q8WUT4 740 aa7.84□□□□□ -1.15
CSTF1-203ENST00000428552 ITLN2Q8WWU7 325 aaPredicted RBP7.84□□□□□ -1.15
CSTF1-203ENST00000428552 CPT1BQ92523 772 aa7.84□□□□□ -1.15
CSTF1-203ENST00000428552 SGSM3Q96HU1 749 aa7.84□□□□□ -1.15
CSTF1-203ENST00000428552 TRIB3Q96RU7 358 aa7.84□□□□□ -1.15
CSTF1-203ENST00000428552 CD180Q99467 661 aa7.84□□□□□ -1.15
CSTF1-203ENST00000428552 SLX1AQ9BQ83 275 aa7.84□□□□□ -1.15
CSTF1-203ENST00000428552 SPATA16Q9BXB7 569 aa7.84□□□□□ -1.15
CSTF1-203ENST00000428552 TLR10Q9BXR5 811 aa7.84□□□□□ -1.15
CSTF1-203ENST00000428552 ZWILCHQ9H900 591 aa7.84□□□□□ -1.15
CSTF1-203ENST00000428552 PCDH18Q9HCL0 1135 aa7.84□□□□□ -1.15
CSTF1-203ENST00000428552 SEPT11Q9NVA2 429 aaKnown RBP7.84□□□□□ -1.15
CSTF1-203ENST00000428552 TMEM63CQ9P1W3 806 aa7.84□□□□□ -1.15
CSTF1-203ENST00000428552 G3BP2Q9UN86 482 aaKnown RBP7.84□□□□□ -1.15
CSTF1-203ENST00000428552 NOVA2Q9UNW9 492 aaKnown RBP7.84□□□□□ -1.15
CSTF1-203ENST00000428552 PCM1Q15154 2024 aa7.84□□□□□ -1.15
CSTF1-203ENST00000428552 SPTBP11277 2137 aa7.84□□□□□ -1.16
CSTF1-203ENST00000428552 FBN3Q75N90 2809 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 UBA6A0AVT1 1052 aaPredicted RBP7.83□□□□□ -1.16
CSTF1-203ENST00000428552 H3BMH7 237 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 MATN3O15232 486 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 VEGFDO43915 354 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 MFSD11O43934 449 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 CDK14O94921 469 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 PIRTP0C851 137 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 RARAP10276 462 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 ATP1A3P13637 1013 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 EDN3P14138 238 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 BPIP17213 487 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 EEF1GP26641 437 aaKnown RBP7.83□□□□□ -1.16
CSTF1-203ENST00000428552 OTX2P32243 289 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 PTGER4P35408 488 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 ARCN1P48444 511 aaKnown RBP7.83□□□□□ -1.16
CSTF1-203ENST00000428552 CTSCP53634 463 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 PER3P56645 1201 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 ITKQ08881 620 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 DMPKQ09013 629 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 GALNT2Q10471 571 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 ART3Q13508 389 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 KRT31Q15323 416 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 HIF1AQ16665 826 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 TUSC1Q2TAM9 212 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 CDKAL1Q5VV42 579 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 PDPK2PQ6A1A2 396 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 IGFL2Q6UWQ7 119 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 SPNS3Q6ZMD2 512 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 GDF7Q7Z4P5 450 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 TMC3Q7Z5M5 1100 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 PPP1R32Q7Z5V6 425 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 FJX1Q86VR8 437 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 FAR1Q8WVX9 515 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 FATE1Q969F0 183 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 RELTQ969Z4 430 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 NRTNQ99748 197 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 ZSCAN5AQ9BUG6 496 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 AGPAT4Q9NRZ5 378 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.83□□□□□ -1.16
CSTF1-203ENST00000428552 PARVAQ9NVD7 372 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 HRASLS2Q9NWW9 162 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 COPG2Q9UBF2 871 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 ITGB1BP2Q9UKP3 347 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 PSMD13Q9UNM6 376 aa7.83□□□□□ -1.16
CSTF1-203ENST00000428552 KLF2Q9Y5W3 355 aaPredicted RBP7.83□□□□□ -1.16
CSTF1-203ENST00000428552 MDC1Q14676 2089 aaKnown RBP7.82□□□□□ -1.16
CSTF1-203ENST00000428552 CCDC78A2IDD5 438 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 OR6C74A6NCV1 312 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 SLC9B1P1A6NJY1 282 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 TMCO5BA8MYB1 307 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 AURKAO14965 403 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 GPR39O43194 453 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 RNF8O76064 485 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 UMODP07911 640 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 CD48P09326 243 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 MSL3P1P0C860 447 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 MTHFD1P11586 935 aaKnown RBP7.82□□□□□ -1.16
CSTF1-203ENST00000428552 CES1P23141 567 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 PCK1P35558 622 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 ARL4AP40617 200 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 TSFMP43897 325 aaKnown RBP7.82□□□□□ -1.16
CSTF1-203ENST00000428552 ARL4DP49703 201 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 ARSEP51690 589 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 TDGF1P3P51864 188 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 SLC25A11Q02978 314 aaKnown RBP7.82□□□□□ -1.16
CSTF1-203ENST00000428552 TMEM115Q12893 351 aaPredicted RBP7.82□□□□□ -1.16
CSTF1-203ENST00000428552 MMRN1Q13201 1228 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 GALNT3Q14435 633 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 NFE2L1Q14494 772 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 SSPNQ14714 243 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 PLCL1Q15111 1095 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 SYCP1Q15431 976 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 ATP13A5Q4VNC0 1218 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 NUP210LQ5VU65 1888 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 NCBP2-AS2Q69YL0 99 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 ZNF324BQ6AW86 544 aaPredicted RBP7.82□□□□□ -1.16
CSTF1-203ENST00000428552 KLHL35Q6PF15 583 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 IRF2BP2Q7Z5L9 587 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 RAB43Q86YS6 212 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms