RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 A0A087WUV0 522 aaPredicted RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 GPR89AB7ZAQ6 455 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 H7C0S8 307 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 HAUS5O94927 633 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 GPR89BP0CG08 455 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 ARL1P40616 181 aaPredicted RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 VSNL1P62760 191 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 SEMA3AQ14563 771 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 NAA30Q147X3 362 aaPredicted RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 NR0B2Q15466 257 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 LGSNQ5TDP6 509 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 UGT3A1Q6NUS8 523 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 ZCCHC8Q6NZY4 707 aaKnown RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 EFL1Q7Z2Z2 1120 aaKnown RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 LMNTD2Q8IXW0 634 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 HM13Q8TCT9 377 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 JPH3Q8WXH2 748 aaPredicted RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 SH3KBP1Q96B97 665 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 CCDC97Q96F63 343 aaPredicted RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 COX14Q96I36 57 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 APOLD1Q96LR9 279 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 CDC6Q99741 560 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 FAM129AQ9BZQ8 928 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 ARGLU1Q9NWB6 273 aaPredicted RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 NINJ2Q9NZG7 142 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 NFKBIL1Q9UBC1 381 aaPredicted RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 SLC23A2Q9UGH3 650 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 TLK1Q9UKI8 766 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 RIMKLBQ9ULI2 386 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 RUVBL2Q9Y230 463 aaKnown RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 PCDHB1Q9Y5F3 818 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 PRSS21Q9Y6M0 314 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 ASCC3Q8N3C0 2202 aaKnown RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 ZCWPW2A0A1B0GU75 182 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 RASSF9O75901 435 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 ESR1P03372 595 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 TYRP1P17643 537 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 KRT15P19012 456 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 TEAD1P28347 426 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 CA5AP35218 305 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 SPRP35270 261 aaPredicted RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 ARL4DP49703 201 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 HHEXQ03014 270 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 TRIP6Q15654 476 aaKnown RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 ZNF423Q2M1K9 1284 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 THEMIS2Q5TEJ8 643 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 MROH9Q5TGP6 573 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 DUS1LQ6P1R4 473 aaKnown RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 USP53Q70EK8 1073 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 SDR16C5Q8N3Y7 309 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 SLC25A45Q8N413 288 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 KYQ8NBH2 561 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 SAP25Q8TEE9 199 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 PARD6BQ9BYG5 372 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 UNKQ9C0B0 810 aaKnown RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 LRRC4CQ9HCJ2 640 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 SPATS2LQ9NUQ6 558 aaKnown RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 INTS10Q9NVR2 710 aaKnown RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 SMOXQ9NWM0 555 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 IRAK4Q9NWZ3 460 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 LRIT1Q9P2V4 623 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 TBC1D29Q9UFV1 150 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 TMPRSS11EQ9UL52 423 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 DGKBQ9Y6T7 804 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 TRIM38O00635 465 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 CDX4O14627 284 aaPredicted RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 KPNA5O15131 536 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 AP2A2O94973 939 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 FAM153BP0C7A2 387 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 SDHBP21912 280 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 BMPR2Q13873 1038 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 EFTUD2Q15029 972 aaKnown RBP eCLIP6.89□□□□□ -1.31
CDC7-203ENST00000428239 KLHL38Q2WGJ6 581 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 FAM153CQ494X1 144 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 ZNF789Q5FWF6 425 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 FRA10AC1Q70Z53 315 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 SLC9B2Q86UD5 537 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 KLHDC8BQ8IXV7 354 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 RAB42Q8N4Z0 105 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 LILRA3Q8N6C8 439 aaPredicted RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 SIDT2Q8NBJ9 832 aaKnown RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 GPR21Q99679 349 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 VPS11Q9H270 941 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 APOBEC2Q9Y235 224 aaKnown RBP6.89□□□□□ -1.31
CDC7-203ENST00000428239 KNTC1P50748 2209 aa6.89□□□□□ -1.31
CDC7-203ENST00000428239 FAM95CA0A1B0GW59 222 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 GSAPA4D1B5 854 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 GAPDHSO14556 408 aaPredicted RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 FUCA1P04066 466 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 HOXC4P09017 264 aaPredicted RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 F3P13726 295 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 GP5P40197 560 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 RXRGP48443 463 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 PRKAA1Q13131 559 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 MSLNQ13421 630 aaPredicted RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 PEAR1Q5VY43 1037 aaPredicted RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 TAX1BP1Q86VP1 789 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 SFTPA2Q8IWL1 248 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 MYO1HQ8N1T3 1032 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 AGGF1Q8N302 714 aaeCLIP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms