RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ZNF99A8MXY4 864 aaPredicted RBP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 ENTPD6O75354 484 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 ZMPSTE24O75844 475 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 GSTT2P0CG29 244 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 RAP2AP10114 183 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 UGT1A3P35503 534 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 TPGS1Q6ZTW0 290 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 DENND2DQ9H6A0 471 aaPredicted RBP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 EIF2B3Q9NR50 452 aaKnown RBP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 PHF24Q9UPV7 400 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 ERVW-1Q9UQF0 538 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 RIMS1Q86UR5 1692 aaKnown RBP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 GLYATL1P3A0A0U1RQE8 302 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 IL1R1P14778 569 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 MAPK12P53778 367 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 SLC30A6Q6NXT4 461 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 GSTCDQ8NEC7 633 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 MAGEB17A8MXT2 336 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 H3BM21 787 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 CDH8P55286 799 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 NTRK3Q16288 839 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 INTS6LQ5JSJ4 861 aaKnown RBP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 IRGQQ8WZA9 623 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 RTFDC1Q9BY42 306 aaPredicted RBP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 C5orf51A6NDU8 294 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 DUXAA6NLW8 204 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 SCGB2A1O75556 95 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 FESP07332 822 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 SLC2A2P11168 524 aaPredicted RBP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 ACVR2AP27037 513 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 PUS10Q3MIT2 529 aaKnown RBP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 PLPPR4Q7Z2D5 763 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 TMPRSS11BQ86T26 416 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 CPA6Q8N4T0 437 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 DCLK1O15075 740 aa14.27□□□□□ -0.12
PTPN13-203ENST00000427191 TPD52L2O43399 206 aaKnown RBP14.27□□□□□ -0.12
PTPN13-203ENST00000427191 ZNF20P17024 532 aa14.27□□□□□ -0.12
PTPN13-203ENST00000427191 KLF10Q13118 480 aa14.27□□□□□ -0.12
PTPN13-203ENST00000427191 PGLYRP2Q96PD5 576 aa14.27□□□□□ -0.12
PTPN13-203ENST00000427191 C14orf166Q9Y224 244 aaKnown RBP14.27□□□□□ -0.12
PTPN13-203ENST00000427191 NR2E1Q9Y466 385 aa14.27□□□□□ -0.12
PTPN13-203ENST00000427191 ANXA8P13928 327 aa14.27□□□□□ -0.12
PTPN13-203ENST00000427191 RFX5P48382 616 aaPredicted RBP14.27□□□□□ -0.12
PTPN13-203ENST00000427191 IFI44LQ53G44 452 aa14.27□□□□□ -0.12
PTPN13-203ENST00000427191 VSTM1Q6UX27 236 aa14.27□□□□□ -0.12
PTPN13-203ENST00000427191 OXR1Q8N573 874 aa14.27□□□□□ -0.12
PTPN13-203ENST00000427191 PRELID2Q8N945 189 aa14.27□□□□□ -0.12
PTPN13-203ENST00000427191 NPEPPSL1A6NEC2 478 aa14.27□□□□□ -0.12
PTPN13-203ENST00000427191 CAPN14A8MX76 684 aa14.27□□□□□ -0.12
PTPN13-203ENST00000427191 TXNL4AP83876 142 aaKnown RBP14.27□□□□□ -0.12
PTPN13-203ENST00000427191 COLEC12Q5KU26 742 aa14.27□□□□□ -0.12
PTPN13-203ENST00000427191 DGLUCYQ7Z3D6 616 aa14.27□□□□□ -0.12
PTPN13-203ENST00000427191 DUSP9Q99956 384 aaKnown RBP14.27□□□□□ -0.12
PTPN13-203ENST00000427191 RGS17Q9UGC6 210 aaPredicted RBP14.27□□□□□ -0.12
PTPN13-203ENST00000427191 SRCP12931 536 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 GADD45AP24522 165 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 GALK1P51570 392 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 BLMHQ13867 455 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 SNAP47Q5SQN1 464 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 GPR65Q8IYL9 337 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 GFM1Q96RP9 751 aaKnown RBP14.27□□□□□ -0.13
PTPN13-203ENST00000427191 AGAP2Q99490 1192 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 CIB1Q99828 191 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 COPS4Q9BT78 406 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 PMF1-BGLAPU3KQ54 211 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 IQSEC2Q5JU85 1478 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 SF1Q15637 639 aaKnown RBP14.27□□□□□ -0.13
PTPN13-203ENST00000427191 RAP1GAP2Q684P5 730 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 IFNLR1Q8IU57 520 aaPredicted RBP14.27□□□□□ -0.13
PTPN13-203ENST00000427191 SPERTQ8NA61 448 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 GLS2Q9UI32 602 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 DGKBQ9Y6T7 804 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 PRR5-ARHGAP8B1AHC4 643 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 LYPLA1O75608 230 aaPredicted RBP14.27□□□□□ -0.13
PTPN13-203ENST00000427191 GOT1P17174 413 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 CLCN7P51798 805 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 OR2B6P58173 313 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 ARHGAP8P85298 464 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 SHC3Q92529 594 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 ZNF350Q9GZX5 532 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 NELFAQ9H3P2 528 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 HPF1Q9NWY4 346 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 ABCD2Q9UBJ2 740 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 MRPS23Q9Y3D9 190 aaKnown RBP14.27□□□□□ -0.13
PTPN13-203ENST00000427191 UBE2Q2LH0YL09 131 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 FSCN2O14926 492 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 GRSF1Q12849 480 aaKnown RBP eCLIP14.27□□□□□ -0.13
PTPN13-203ENST00000427191 RNASEH2BQ5TBB1 312 aaKnown RBP14.27□□□□□ -0.13
PTPN13-203ENST00000427191 REP15Q6BDI9 236 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 FAM151BQ6UXP7 276 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 LRRC70Q7Z2Q7 622 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 SAMD7Q7Z3H4 446 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 LINC00116Q8NCU8 138 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 OR10H4Q8NGA5 316 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 PCDHGC3Q9UN70 934 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 WASF3Q9UPY6 502 aa14.27□□□□□ -0.13
PTPN13-203ENST00000427191 A0A1B0GVM2 712 aa14.26□□□□□ -0.13
PTPN13-203ENST00000427191 TCAF2A6NFQ2 919 aa14.26□□□□□ -0.13
PTPN13-203ENST00000427191 M0R129 80 aa14.26□□□□□ -0.13
PTPN13-203ENST00000427191 PON3Q15166 354 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms