RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 LIPAP38571 399 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 POU6F2P78424 691 aaPredicted RBP11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 CHRNB3Q05901 458 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 ZNF404Q494X3 552 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 ZMAT1Q5H9K5 638 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 HFE2Q6ZVN8 426 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 ZNF438Q7Z4V0 828 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 B3GNT8Q7Z7M8 397 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 SLC35F5Q8WV83 523 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 JPH3Q8WXH2 748 aaPredicted RBP11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 CDK15Q96Q40 435 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 BCL7BQ9BQE9 202 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 SLC7A5P2Q9GIP4 190 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 EHD3Q9NZN3 535 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 KCNN3Q9UGI6 736 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 NUFIP1Q9UHK0 495 aaKnown RBP11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 ARIH1Q9Y4X5 557 aaPredicted RBP11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 KIAA1217Q5T5P2 1943 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 LTBP3Q9NS15 1303 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 EVPLLA8MZ36 301 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 SMLR1H3BR10 107 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 CTDSP2O14595 271 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 ZW10O43264 779 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 CRCPO75575 148 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 CCDC159P0C7I6 412 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 GRK5P34947 590 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 ETV3P41162 512 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 TNFAIP1Q13829 316 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 IRF3Q14653 427 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 UNC50Q53HI1 259 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 BEND5Q7L4P6 421 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 GALNT10Q86SR1 603 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 ZNF598Q86UK7 904 aaKnown RBP11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 OSTM1Q86WC4 334 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 SVOPQ8N4V2 548 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 PTGR2Q8N8N7 351 aaPredicted RBP11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 PPP1R13LQ8WUF5 828 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 LPAR1Q92633 364 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 PTERQ96BW5 349 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 ZNF419Q96HQ0 510 aaPredicted RBP11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 VPS35Q96QK1 796 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 EIF2B3Q9NR50 452 aaKnown RBP11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 MN1Q10571 1320 aaPredicted RBP11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 AGAP5A6NIR3 686 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 ARVCFO00192 962 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 CLDN5O00501 218 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 TSC22D2O75157 780 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 CSF2P04141 144 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 ENPP1P22413 925 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 PKLRP30613 574 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 ST13P50502 369 aaKnown RBP11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 MXD4Q14582 209 aaPredicted RBP11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 PTPRCAPQ14761 206 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 TTC23Q5W5X9 447 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 BLOC1S3Q6QNY0 202 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 HACD2Q6Y1H2 254 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 Q6ZPB1 254 aaPredicted RBP11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 MILR1Q7Z6M3 343 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 BPIFB1Q8TDL5 484 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 FAM49AQ9H0Q0 323 aaPredicted RBP11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 PIGVQ9NUD9 493 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 FBXO5Q9UKT4 447 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 FZD10Q9ULW2 581 aa11.15□□□□□ -0.62
SEC61A1-202ENST00000424880 FAM92AA1XBS5 289 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 B8ZZF3 427 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 RGS5O15539 181 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 AKR7A2O43488 359 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 TSPAN3O60637 253 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 DNAJB5O75953 348 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 NDST3O95803 873 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 NAGAP17050 411 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 GADD45AP24522 165 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 UQCRC1P31930 480 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 GLUD2P49448 558 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 YWHAHQ04917 246 aaPredicted RBP11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 CRY1Q16526 586 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 DENND5AQ6IQ26 1287 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 MPZL3Q6UWV2 235 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 OR10A6Q8NH74 314 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 UBASH3BQ8TF42 649 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 SNAPC3Q92966 411 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 ST6GAL2Q96JF0 529 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 PCYT2Q99447 389 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 FICDQ9BVA6 458 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 ROGDIQ9GZN7 287 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 NUAK2Q9H093 628 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 CCDC177Q9NQR7 707 aaPredicted RBP11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 KIAA1257Q9ULG3 409 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 MAGEB16A2A368 324 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 MYO1GB0I1T2 1018 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 ENPP3O14638 875 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 BCKDKO14874 412 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 PRKD3O94806 890 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 MSL3P1P0C860 447 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 BMP1P13497 986 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 CTRB1P17538 263 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 S100A5P33763 92 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 NOS2P35228 1153 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 CDKN2DP55273 166 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 ADIGQ0VDE8 80 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms