RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 BRAFP15056 766 aa18.23■□□□□ 0.51
DDR1-233ENST00000421124 HALP42357 657 aa18.23■□□□□ 0.51
DDR1-233ENST00000421124 HHEXQ03014 270 aa18.23■□□□□ 0.51
DDR1-233ENST00000421124 CAV1Q03135 178 aa18.23■□□□□ 0.51
DDR1-233ENST00000421124 PDIA2Q13087 525 aaKnown RBP18.23■□□□□ 0.51
DDR1-233ENST00000421124 CBLBQ13191 982 aa18.23■□□□□ 0.51
DDR1-233ENST00000421124 NR1D2Q14995 579 aa18.23■□□□□ 0.51
DDR1-233ENST00000421124 HP1BP3Q5SSJ5 553 aaPredicted RBP18.23■□□□□ 0.51
DDR1-233ENST00000421124 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.23■□□□□ 0.51
DDR1-233ENST00000421124 RNF187Q5TA31 235 aaPredicted RBP18.23■□□□□ 0.51
DDR1-233ENST00000421124 IGDCC3Q8IVU1 814 aa18.23■□□□□ 0.51
DDR1-233ENST00000421124 CFAP206Q8IYR0 622 aa18.23■□□□□ 0.51
DDR1-233ENST00000421124 NOA1Q8NC60 698 aaKnown RBP18.23■□□□□ 0.51
DDR1-233ENST00000421124 WDR48Q8TAF3 677 aa18.23■□□□□ 0.51
DDR1-233ENST00000421124 CALML6Q8TD86 181 aa18.23■□□□□ 0.51
DDR1-233ENST00000421124 ART4Q93070 314 aa18.23■□□□□ 0.51
DDR1-233ENST00000421124 SCHIP1Q9P0W5 487 aaPredicted RBP18.23■□□□□ 0.51
DDR1-233ENST00000421124 CPNE7Q9UBL6 633 aa18.23■□□□□ 0.51
DDR1-233ENST00000421124 PSMD13Q9UNM6 376 aa18.23■□□□□ 0.51
DDR1-233ENST00000421124 WASF3Q9UPY6 502 aa18.23■□□□□ 0.51
DDR1-233ENST00000421124 WDR37Q9Y2I8 494 aa18.23■□□□□ 0.51
DDR1-233ENST00000421124 UBA6A0AVT1 1052 aaPredicted RBP18.22■□□□□ 0.51
DDR1-233ENST00000421124 E7ESA3 106 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 ZW10O43264 779 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 XRCC1P18887 633 aaPredicted RBP18.22■□□□□ 0.51
DDR1-233ENST00000421124 GPR3P46089 330 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 PLTPP55058 493 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 UBE2IP63279 158 aaKnown RBP18.22■□□□□ 0.51
DDR1-233ENST00000421124 ZNF658BQ4V348 819 aaPredicted RBP18.22■□□□□ 0.51
DDR1-233ENST00000421124 HES3Q5TGS1 186 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 ZNF470Q6ECI4 717 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 XKR5Q6UX68 686 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 CENPUQ71F23 418 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 TMPRSS7Q7RTY8 843 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 SPRED1Q7Z699 444 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 TMPRSS12Q86WS5 348 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 LRRC6Q86X45 466 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 CILP2Q8IUL8 1156 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 TRIM48Q8IWZ4 208 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 LMNTD2Q8IXW0 634 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 Q8N9G6 341 aaPredicted RBP18.22■□□□□ 0.51
DDR1-233ENST00000421124 CFAP36Q96G28 342 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 WDR83Q9BRX9 315 aaKnown RBP18.22■□□□□ 0.51
DDR1-233ENST00000421124 FAM167BQ9BTA0 163 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 TSSK1BQ9BXA7 367 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 COG4Q9H9E3 785 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 ZC3H7BQ9UGR2 993 aaKnown RBP18.22■□□□□ 0.51
DDR1-233ENST00000421124 GNPTGQ9UJJ9 305 aa18.22■□□□□ 0.51
DDR1-233ENST00000421124 OR52A4PA6NMU1 304 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 SLC35G4P0C7Q5 338 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 RPS3P23396 243 aaKnown RBP eCLIP18.21■□□□□ 0.51
DDR1-233ENST00000421124 SLC19A1P41440 591 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 CLDN6P56747 220 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 CCL7P80098 99 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 CLCA4Q14CN2 919 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 GLE1Q53GS7 698 aaKnown RBP18.21■□□□□ 0.51
DDR1-233ENST00000421124 PTRHD1Q6GMV3 140 aaKnown RBP18.21■□□□□ 0.51
DDR1-233ENST00000421124 ZNF449Q6P9G9 518 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 UNC5AQ6ZN44 842 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 KCNMB4Q86W47 210 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 ANKMY2Q8IV38 441 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 LILRA3Q8N6C8 439 aaPredicted RBP18.21■□□□□ 0.51
DDR1-233ENST00000421124 ELMO1Q92556 727 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 LPGAT1Q92604 370 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 SH3KBP1Q96B97 665 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 CXorf40BQ96DE9 158 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 SCNM1Q9BWG6 230 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 CARD6Q9BX69 1037 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 WWP1Q9H0M0 922 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 P2RY12Q9H244 342 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 LRRN3Q9H3W5 708 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 SYNDIG1Q9H7V2 258 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 POT1Q9NUX5 634 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 INTS10Q9NVR2 710 aaKnown RBP18.21■□□□□ 0.51
DDR1-233ENST00000421124 ZNF624Q9P2J8 865 aaPredicted RBP18.21■□□□□ 0.51
DDR1-233ENST00000421124 VPS9D1Q9Y2B5 631 aa18.21■□□□□ 0.51
DDR1-233ENST00000421124 NCOR2Q9Y618 2525 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 NTN3O00634 580 aaPredicted RBP18.2■□□□□ 0.5
DDR1-233ENST00000421124 LIN7AO14910 233 aaPredicted RBP18.2■□□□□ 0.5
DDR1-233ENST00000421124 EIF3HO15372 352 aaKnown RBP eCLIP18.2■□□□□ 0.55e-6■■■□□ 14.9
DDR1-233ENST00000421124 MT-CO3P00414 261 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 VIPP01282 170 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 RPLP0P05388 317 aaKnown RBP18.2■□□□□ 0.5
DDR1-233ENST00000421124 SPINK2P20155 84 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 ALDH4A1P30038 563 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 EIF3BP55884 814 aaKnown RBP18.2■□□□□ 0.5
DDR1-233ENST00000421124 OR1D5P58170 312 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 SHC2P98077 582 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 GUCY2DQ02846 1103 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 RPA4Q13156 261 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 SPIDRQ14159 915 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 FASTKD3Q14CZ7 662 aaKnown RBP18.2■□□□□ 0.5
DDR1-233ENST00000421124 TRADDQ15628 312 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 RPE65Q16518 533 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 HSP90AA5PQ58FG0 334 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 CDCP2Q5VXM1 449 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 STEAP4Q687X5 459 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 UNC5BQ8IZJ1 945 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 FBXO36Q8NEA4 188 aa18.2■□□□□ 0.5
DDR1-233ENST00000421124 GABPB2Q8TAK5 448 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms