RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 STAB1Q9NY15 2570 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 CROCCQ5TZA2 2017 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 PLXNA2O75051 1894 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 A0A0A6YYK5 440 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 A0A0D9SFI3 127 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 hCG_1642624A0A1W2PR95 340 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 SH3PXD2BA1X283 911 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 MACROD2A1Z1Q3 448 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 CTAGE9A4FU28 777 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 GMNCA6NCL1 334 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 CCT8L1PA6NM43 557 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 STMND1H3BQB6 276 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 AP3B1O00203 1094 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 O00370 1275 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 SH2B2O14492 632 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 ALOX15BO15296 676 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 MSH4O15457 936 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 CACNG3O60359 315 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 DKC1O60832 514 aaKnown RBP eCLIP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 DAB1O75553 588 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 PDE5AO76074 875 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 PLEKHA8P1O95397 391 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 GNA14O95837 355 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 KCNE1P15382 129 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 RPS2P15880 293 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 VCLP18206 1134 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 TYMPP19971 482 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 IL10P22301 178 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 PRKACBP22694 351 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 APEX1P27695 318 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 PHBP35232 272 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 TRIM23P36406 574 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 GLRBP48167 497 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 GPR15P49685 360 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 TMED10P49755 219 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 HNRNPFP52597 415 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 ALDH18A1P54886 795 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 KRTAP10-9P60411 292 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 SRP54P61011 504 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 SLC7A9P82251 487 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 RELAQ04206 551 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 TBL3Q12788 808 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 SP140Q13342 867 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 ZNF177Q13360 481 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 SQLEQ14534 574 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 CDKN3Q16667 212 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 FAM187BQ17R55 369 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 BMT2Q1RMZ1 405 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 DEFB109BQ30KR1 87 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 KRT71Q3SY84 523 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 CDONQ4KMG0 1287 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 XKR4Q5GH76 650 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 WASHC2DQ5SRD0 308 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 TMTC4Q5T4D3 741 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 TTC22Q5TAA0 569 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 RNASEH2BQ5TBB1 312 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 ATL3Q6DD88 541 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 PPP4R4Q6NUP7 873 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 CRTC1Q6UUV9 634 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 LRIG3Q6UXM1 1119 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 DSTYKQ6XUX3 929 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 USP45Q70EL2 814 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 Q71RC1 249 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 CYB5R4Q7L1T6 521 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 CHST15Q7LFX5 561 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 EFL1Q7Z2Z2 1120 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 SNX32Q86XE0 403 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 ZSWIM9Q86XI8 627 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 PAF1Q8N7H5 531 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 DDHD1Q8NEL9 900 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 CCDC12Q8WUD4 166 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 ARHGEF2Q92974 986 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 EME1Q96AY2 570 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 SERAC1Q96JX3 654 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 FAM227BQ96M60 508 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 XPO6Q96QU8 1125 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 CDRT15Q96T59 188 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 ACO2Q99798 780 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 SOX7Q9BT81 388 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 RNF38Q9H0F5 515 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 ZCWPW1Q9H0M4 648 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 ZNF700Q9H0M5 742 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 GLT8D2Q9H1C3 349 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 CCDC134Q9H6E4 229 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 CNOT10Q9H9A5 744 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 XPNPEP1Q9NQW7 623 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 DLL4Q9NR61 685 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 THAP1Q9NVV9 213 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 GID8Q9NWU2 228 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 SMPD4Q9NXE4 827 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 NCKIPSDQ9NZQ3 722 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 KIF17Q9P2E2 1029 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 ARHGAP20Q9P2F6 1191 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 POLG2Q9UHN1 485 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 SLC12A6Q9UHW9 1150 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 AGO2Q9UKV8 859 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 CSPG4Q6UVK1 2322 aa5.48□□□□□ -1.53
ECHDC1-206ENST00000417628 ESPL1Q14674 2120 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms