RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 DNAJC1Q96KC8 554 aaKnown RBP14.79□□□□□ -0.04
UBXN4-203ENST00000416538 RMDN2Q96LZ7 410 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 TBL1YQ9BQ87 522 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 ASPSCR1Q9BZE9 553 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 ZCCHC2Q9C0B9 1178 aaKnown RBP14.79□□□□□ -0.04
UBXN4-203ENST00000416538 ZNF768Q9H5H4 540 aaKnown RBP14.79□□□□□ -0.04
UBXN4-203ENST00000416538 FAM96AQ9H5X1 160 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 PIH1D1Q9NWS0 290 aaKnown RBP14.79□□□□□ -0.04
UBXN4-203ENST00000416538 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.79□□□□□ -0.04
UBXN4-203ENST00000416538 FAM8A1Q9UBU6 413 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 IL17BQ9UHF5 180 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 MYO18BQ8IUG5 2567 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 TJP3O95049 919 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 ITGB2P05107 769 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 MTHFD1P11586 935 aaKnown RBP14.78□□□□□ -0.04
UBXN4-203ENST00000416538 AMD1P17707 334 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 NFKB2Q00653 900 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 ZNF658BQ4V348 819 aaPredicted RBP14.78□□□□□ -0.04
UBXN4-203ENST00000416538 BCL7AQ4VC05 210 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 CEACAM20Q6UY09 585 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 CERS6Q6ZMG9 384 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 FAM92BQ6ZTR7 304 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 TAB3Q8N5C8 712 aaPredicted RBP14.78□□□□□ -0.04
UBXN4-203ENST00000416538 FAM71DQ8N9W8 422 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 ATG4AQ8WYN0 398 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 CALR3Q96L12 384 aaKnown RBP14.78□□□□□ -0.04
UBXN4-203ENST00000416538 TTC25Q96NG3 672 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 TEFMQ96QE5 360 aaKnown RBP14.78□□□□□ -0.04
UBXN4-203ENST00000416538 INSM2Q96T92 566 aaPredicted RBP14.78□□□□□ -0.04
UBXN4-203ENST00000416538 NRTNQ99748 197 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 WWP1Q9H0M0 922 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 ASB8Q9H765 288 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 ARNT2Q9HBZ2 717 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 AMFRQ9UKV5 643 aa14.78□□□□□ -0.04
UBXN4-203ENST00000416538 AAR2Q9Y312 384 aaKnown RBP14.78□□□□□ -0.04
UBXN4-203ENST00000416538 C5orf60A6NFR6 353 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 TIAF1O95411 115 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 VCLP18206 1134 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 MSH3P20585 1137 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 F8A1P23610 371 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 CDC25BP30305 580 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 LONRF2Q1L5Z9 754 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 ATP1A1-AS1Q5TC04 95 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 METRNLQ641Q3 311 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 IRGCQ6NXR0 463 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 ZNF605Q86T29 641 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 NLGN4XQ8N0W4 816 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 NXPE1Q8N323 547 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 NLGN4YQ8NFZ3 816 aaPredicted RBP14.77□□□□□ -0.05
UBXN4-203ENST00000416538 KLHL6Q8WZ60 621 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 HES6Q96HZ4 224 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 PPM1MQ96MI6 270 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 TMEM121Q9BTD3 319 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 IMP3Q9NV31 184 aaKnown RBP14.77□□□□□ -0.05
UBXN4-203ENST00000416538 SEMA5BQ9P283 1151 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 EPHA6Q9UF33 1036 aa14.77□□□□□ -0.05
UBXN4-203ENST00000416538 MRPS18BQ9Y676 258 aaKnown RBP14.77□□□□□ -0.05
UBXN4-203ENST00000416538 MED13Q9UHV7 2174 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 IGHV5-51A0A0C4DH38 117 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 TRBV5-4A0A0C4DH59 114 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 MGAT4DA6NG13 374 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 C2orf81A6NN90 581 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 B8ZZF3 427 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 TERTO14746 1132 aaKnown RBP14.76□□□□□ -0.05
UBXN4-203ENST00000416538 POLR1CO15160 346 aaPredicted RBP14.76□□□□□ -0.05
UBXN4-203ENST00000416538 NKX2-8O15522 239 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 KCNJ13O60928 360 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 STK10O94804 968 aaKnown RBP14.76□□□□□ -0.05
UBXN4-203ENST00000416538 TPH1P17752 444 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 OAS2P29728 719 aaKnown RBP14.76□□□□□ -0.05
UBXN4-203ENST00000416538 HALP42357 657 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 PRLHRP49683 370 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 FOXM1Q08050 763 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 NFATC3Q12968 1075 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 PRPSAP1Q14558 356 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 KCNAB1Q14722 419 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 CACHD1Q5VU97 1274 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 RBM12BQ8IXT5 1001 aaKnown RBP14.76□□□□□ -0.05
UBXN4-203ENST00000416538 OR2L2Q8NH16 312 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 ELMO2Q96JJ3 720 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 OR6C1Q96RD1 312 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 RAB33BQ9H082 229 aa14.76□□□□□ -0.05
UBXN4-203ENST00000416538 DNMT3AQ9Y6K1 912 aaPredicted RBP14.76□□□□□ -0.05
UBXN4-203ENST00000416538 TNRC6AQ8NDV7 1962 aaKnown RBP14.75□□□□□ -0.05
UBXN4-203ENST00000416538 IGLV3-16A0A075B6K0 115 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 CCDC78A2IDD5 438 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 MIF4GDA9UHW6 222 aaKnown RBP14.75□□□□□ -0.05
UBXN4-203ENST00000416538 TOX3O15405 576 aaPredicted RBP14.75□□□□□ -0.05
UBXN4-203ENST00000416538 RASSF9O75901 435 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 MC4RP32245 332 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 STAT5AP42229 794 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 ARCN1P48444 511 aaKnown RBP14.75□□□□□ -0.05
UBXN4-203ENST00000416538 KIF5AQ12840 1032 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 ARHGEF18Q6ZSZ5 1173 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 SNX20Q7Z614 316 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 PRUNE1Q86TP1 453 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 PIANPQ8IYJ0 282 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 SLC45A3Q96JT2 553 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 SLC41A2Q96JW4 573 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 LINC00615Q96LM1 132 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms