RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 COL27A1Q8IZC6 1860 aaPredicted RBP24.79■■□□□ 1.56
CPNE1-207ENST00000414664 CCDC187A0A096LP49 1063 aa24.79■■□□□ 1.56
CPNE1-207ENST00000414664 LILRA5A6NI73 299 aa24.79■■□□□ 1.56
CPNE1-207ENST00000414664 OR52A4PA6NMU1 304 aa24.79■■□□□ 1.56
CPNE1-207ENST00000414664 FTH1P02794 183 aa24.79■■□□□ 1.56
CPNE1-207ENST00000414664 SLC35G4P0C7Q5 338 aa24.79■■□□□ 1.56
CPNE1-207ENST00000414664 PDX1P52945 283 aa24.79■■□□□ 1.56
CPNE1-207ENST00000414664 ZFP36L1Q07352 338 aaKnown RBP24.79■■□□□ 1.56
CPNE1-207ENST00000414664 EIF3IQ13347 325 aaKnown RBP24.79■■□□□ 1.56
CPNE1-207ENST00000414664 IZUMO3Q5VZ72 239 aa24.79■■□□□ 1.56
CPNE1-207ENST00000414664 TMEM26Q6ZUK4 368 aa24.79■■□□□ 1.56
CPNE1-207ENST00000414664 JAMLQ86YT9 394 aa24.79■■□□□ 1.56
CPNE1-207ENST00000414664 WDR36Q8NI36 951 aaKnown RBP24.79■■□□□ 1.56
CPNE1-207ENST00000414664 LIN37Q96GY3 246 aaPredicted RBP24.79■■□□□ 1.56
CPNE1-207ENST00000414664 ZMYND15Q9H091 742 aa24.79■■□□□ 1.56
CPNE1-207ENST00000414664 POLR1BQ9H9Y6 1135 aa24.79■■□□□ 1.56
CPNE1-207ENST00000414664 RDH14Q9HBH5 336 aa24.79■■□□□ 1.56
CPNE1-207ENST00000414664 EPB41L5Q9HCM4 733 aa24.79■■□□□ 1.56
CPNE1-207ENST00000414664 FAM8A1Q9UBU6 413 aa24.79■■□□□ 1.56
CPNE1-207ENST00000414664 FAM237BA0A1B0GVD1 139 aa24.78■■□□□ 1.56
CPNE1-207ENST00000414664 SMAPO00193 183 aa24.78■■□□□ 1.56
CPNE1-207ENST00000414664 VAPBO95292 243 aa24.78■■□□□ 1.56
CPNE1-207ENST00000414664 LSSP48449 732 aa24.78■■□□□ 1.56
CPNE1-207ENST00000414664 RPE65Q16518 533 aa24.78■■□□□ 1.56
CPNE1-207ENST00000414664 NKAIN2Q5VXU1 208 aa24.78■■□□□ 1.56
CPNE1-207ENST00000414664 KIAA0930Q6ICG6 404 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-207ENST00000414664 CES3Q6UWW8 571 aa24.78■■□□□ 1.56
CPNE1-207ENST00000414664 B3GNT8Q7Z7M8 397 aa24.78■■□□□ 1.56
CPNE1-207ENST00000414664 MDM1Q8TC05 714 aa24.78■■□□□ 1.56
CPNE1-207ENST00000414664 TMEM159Q96B96 161 aa24.78■■□□□ 1.56
CPNE1-207ENST00000414664 TRIM44Q96DX7 344 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-207ENST00000414664 KRT12Q99456 494 aa24.78■■□□□ 1.56
CPNE1-207ENST00000414664 FOXP3Q9BZS1 431 aa24.78■■□□□ 1.56
CPNE1-207ENST00000414664 WWP1Q9H0M0 922 aa24.78■■□□□ 1.56
CPNE1-207ENST00000414664 SLC40A1Q9NP59 571 aa24.78■■□□□ 1.56
CPNE1-207ENST00000414664 PFDN6O15212 129 aa24.77■■□□□ 1.56
CPNE1-207ENST00000414664 POLBP06746 335 aa24.77■■□□□ 1.56
CPNE1-207ENST00000414664 MAGEA3P43357 314 aa24.77■■□□□ 1.56
CPNE1-207ENST00000414664 GABREP78334 506 aa24.77■■□□□ 1.56
CPNE1-207ENST00000414664 RPA4Q13156 261 aa24.77■■□□□ 1.56
CPNE1-207ENST00000414664 C3orf38Q5JPI3 329 aa24.77■■□□□ 1.56
CPNE1-207ENST00000414664 MRNIPQ6NTE8 343 aa24.77■■□□□ 1.56
CPNE1-207ENST00000414664 TMEM71Q6P5X7 295 aa24.77■■□□□ 1.56
CPNE1-207ENST00000414664 SDCCAG8Q86SQ7 713 aaPredicted RBP24.77■■□□□ 1.56
CPNE1-207ENST00000414664 SLITRK4Q8IW52 837 aa24.77■■□□□ 1.56
CPNE1-207ENST00000414664 OTUD6BQ8N6M0 293 aa24.77■■□□□ 1.56
CPNE1-207ENST00000414664 OR4D9Q8NGE8 314 aa24.77■■□□□ 1.56
CPNE1-207ENST00000414664 NUDT22Q9BRQ3 303 aa24.77■■□□□ 1.56
CPNE1-207ENST00000414664 TSSK1BQ9BXA7 367 aa24.77■■□□□ 1.56
CPNE1-207ENST00000414664 COG4Q9H9E3 785 aa24.77■■□□□ 1.56
CPNE1-207ENST00000414664 AKAP7Q9P0M2 348 aaPredicted RBP24.77■■□□□ 1.56
CPNE1-207ENST00000414664 PRSS21Q9Y6M0 314 aa24.77■■□□□ 1.56
CPNE1-207ENST00000414664 ACACBO00763 2458 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 TTI1O43156 1089 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 OR1I1O60431 355 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 NDUFS3O75489 264 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 CAPNS1P04632 268 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 MPOP05164 745 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 MAPK9P45984 424 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 TRA2AQ13595 282 aaKnown RBP eCLIP24.76■■□□□ 1.55
CPNE1-207ENST00000414664 SEMA3AQ14563 771 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 PHF19Q5T6S3 580 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 WDR74Q6RFH5 385 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-207ENST00000414664 RAB11FIP2Q7L804 512 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 SPATA4Q8NEY3 305 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 ZFPM2Q8WW38 1151 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 C16orf45Q96MC5 204 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-207ENST00000414664 C12orf66Q96MD2 445 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 TBC1D10AQ9BXI6 508 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 IMP3Q9NV31 184 aaKnown RBP24.76■■□□□ 1.55
CPNE1-207ENST00000414664 SATB2Q9UPW6 733 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 PCDHGA8Q9Y5G5 932 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 HEBP2Q9Y5Z4 205 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 MAD1L1Q9Y6D9 718 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 AKAP13Q12802 2813 aa24.76■■□□□ 1.55
CPNE1-207ENST00000414664 TPRP12270 2363 aaKnown RBP24.76■■□□□ 1.55
CPNE1-207ENST00000414664 IFRD1O00458 451 aaPredicted RBP24.75■■□□□ 1.55
CPNE1-207ENST00000414664 NDC80O14777 642 aa24.75■■□□□ 1.55
CPNE1-207ENST00000414664 LIN7AO14910 233 aaPredicted RBP24.75■■□□□ 1.55
CPNE1-207ENST00000414664 MTHFD1P11586 935 aaKnown RBP24.75■■□□□ 1.55
CPNE1-207ENST00000414664 IVDP26440 423 aa24.75■■□□□ 1.55
CPNE1-207ENST00000414664 LIMK2P53671 638 aa24.75■■□□□ 1.55
CPNE1-207ENST00000414664 MORF4L2Q15014 288 aa24.75■■□□□ 1.55
CPNE1-207ENST00000414664 ANKRD20A4Q4UJ75 823 aa24.75■■□□□ 1.55
CPNE1-207ENST00000414664 DNAJC21Q5F1R6 531 aaKnown RBP24.75■■□□□ 1.55
CPNE1-207ENST00000414664 CAPRIN2Q6IMN6 1127 aaKnown RBP24.75■■□□□ 1.55
CPNE1-207ENST00000414664 TMPRSS9Q7Z410 1059 aa24.75■■□□□ 1.55
CPNE1-207ENST00000414664 MAATS1Q7Z4T9 603 aa24.75■■□□□ 1.55
CPNE1-207ENST00000414664 TMEM135Q86UB9 458 aa24.75■■□□□ 1.55
CPNE1-207ENST00000414664 NCSTNQ92542 709 aa24.75■■□□□ 1.55
CPNE1-207ENST00000414664 ZNF669Q96BR6 464 aaPredicted RBP24.75■■□□□ 1.55
CPNE1-207ENST00000414664 SIGLEC10Q96LC7 697 aa24.75■■□□□ 1.55
CPNE1-207ENST00000414664 INSM2Q96T92 566 aaPredicted RBP24.75■■□□□ 1.55
CPNE1-207ENST00000414664 TCF12Q99081 682 aa24.75■■□□□ 1.55
CPNE1-207ENST00000414664 CMKLR1Q99788 373 aa24.75■■□□□ 1.55
CPNE1-207ENST00000414664 SEMA6CQ9H3T2 930 aa24.75■■□□□ 1.55
CPNE1-207ENST00000414664 MARCH4Q9P2E8 410 aaPredicted RBP24.75■■□□□ 1.55
CPNE1-207ENST00000414664 RPS6KL1Q9Y6S9 549 aa24.75■■□□□ 1.55
CPNE1-207ENST00000414664 COLEC10Q9Y6Z7 277 aa24.75■■□□□ 1.55
CPNE1-207ENST00000414664 CHD8Q9HCK8 2581 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms