RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	NAXD	Q8IW45	347 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	CTAGE3P	Q8IX95	158 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	EID2	Q8N6I1	236 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	RHBDD1	Q8TEB9	315 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	FBF1	Q8TES7	1133 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	DPEP2	Q9H4A9	486 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	NCKIPSD	Q9NZQ3	722 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	SLC17A6	Q9P2U8	582 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	FAM8A1	Q9UBU6	413 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	SLC23A2	Q9UGH3	650 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	CDV3	Q9UKY7	258 aa	Known RBP	12.93	□□□□□ -0.34
SF1-206	ENST00000413725	CORO1C	Q9ULV4	474 aa	Predicted RBP	12.93	□□□□□ -0.34
SF1-206	ENST00000413725	FAM159B	A6NKW6	160 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	PDZK1P1	A8MUH7	402 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725		B4DGG1	531 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725		E5RI56	91 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	KPNA5	O15131	536 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	SNX2	O60749	519 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	HAUS5	O94927	633 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	TRIM16	O95361	564 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	ITGB6	P18564	788 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	SDHB	P21912	280 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	NFE2L1	Q14494	772 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	TMED2	Q15363	201 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	KBTBD12	Q3ZCT8	623 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	SYTL3	Q4VX76	610 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	ZNF789	Q5FWF6	425 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	CTSL3P	Q5NE16	218 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	CNST	Q6PJW8	725 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	STRA8	Q7Z7C7	330 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	CFAP206	Q8IYR0	622 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	PPM1N	Q8N819	430 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	ZDHHC1	Q8WTX9	485 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	ELMO1	Q92556	727 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	CFAP54	Q96N23	3096 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	BIRC8	Q96P09	236 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	CYTH2	Q99418	400 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	CPNE1	Q99829	537 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	PARD6B	Q9BYG5	372 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	COG4	Q9H9E3	785 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	FTSJ1	Q9UET6	329 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	ACSL5	Q9ULC5	683 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	BTBD3	Q9Y2F9	522 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	ST14	Q9Y5Y6	855 aa		12.92	□□□□□ -0.34
SF1-206	ENST00000413725	KNTC1	P50748	2209 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725		A0A087WUV0	522 aa	Predicted RBP	12.91	□□□□□ -0.34
SF1-206	ENST00000413725	OR5K4	A6NMS3	321 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	TRIM38	O00635	465 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	SLC30A4	O14863	429 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	LIN7A	O14910	233 aa	Predicted RBP	12.91	□□□□□ -0.34
SF1-206	ENST00000413725	SIGLEC6	O43699	453 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	SH3BP5	O60239	455 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	AHSG	P02765	367 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	APOA4	P06727	396 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	F7	P08709	466 aa	Predicted RBP	12.91	□□□□□ -0.34
SF1-206	ENST00000413725	ABHD2	P08910	425 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	SLC35G4	P0C7Q5	338 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	GIMD1	P0DJR0	217 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	F3	P13726	295 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	CHRM3	P20309	590 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	GP5	P40197	560 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	HAL	P42357	657 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	RPIA	P49247	311 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	CSE1L	P55060	971 aa	Known RBP	12.91	□□□□□ -0.34
SF1-206	ENST00000413725	PLOD1	Q02809	727 aa	Predicted RBP	12.91	□□□□□ -0.34
SF1-206	ENST00000413725	RPA4	Q13156	261 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	BOP1	Q14137	746 aa	Known RBP	12.91	□□□□□ -0.34
SF1-206	ENST00000413725	SEPT7	Q16181	437 aa	Known RBP	12.91	□□□□□ -0.34
SF1-206	ENST00000413725	METRNL	Q641Q3	311 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	EMB	Q6PCB8	327 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	WASH2P	Q6VEQ5	465 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	OTOA	Q7RTW8	1153 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	KRT222	Q8N1A0	295 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	ARL10	Q8N8L6	244 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	FAM181A	Q8N9Y4	354 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	TMEM159	Q96B96	161 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	CDC6	Q99741	560 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	AARSD1	Q9BTE6	412 aa	Known RBP	12.91	□□□□□ -0.34
SF1-206	ENST00000413725	FUT8	Q9BYC5	575 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	TXLNGY	Q9BZA5	131 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	SLC32A1	Q9H598	525 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	ACSS3	Q9H6R3	686 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	WASH6P	Q9NQA3	447 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	SMYD2	Q9NRG4	433 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	SPATS2L	Q9NUQ6	558 aa	Known RBP	12.91	□□□□□ -0.34
SF1-206	ENST00000413725	SIRPG	Q9P1W8	387 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	GULP1	Q9UBP9	304 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	TBC1D29	Q9UFV1	150 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	PCOLCE2	Q9UKZ9	415 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	PSAT1	Q9Y617	370 aa		12.91	□□□□□ -0.34
SF1-206	ENST00000413725	PRR19	A6NJB7	356 aa		12.9	□□□□□ -0.34
SF1-206	ENST00000413725	IQCF5	A8MTL0	148 aa		12.9	□□□□□ -0.34
SF1-206	ENST00000413725	CXorf49	A8MYA2	514 aa	Predicted RBP	12.9	□□□□□ -0.34
SF1-206	ENST00000413725	RIPK2	O43353	540 aa		12.9	□□□□□ -0.34
SF1-206	ENST00000413725	NIPSNAP2	O75323	286 aa		12.9	□□□□□ -0.34
SF1-206	ENST00000413725	VPS26A	O75436	327 aa		12.9	□□□□□ -0.34
SF1-206	ENST00000413725	LDOC1	O95751	146 aa	Predicted RBP	12.9	□□□□□ -0.34
SF1-206	ENST00000413725	RPL10	P27635	214 aa	Known RBP	12.9	□□□□□ -0.34
SF1-206	ENST00000413725	GABRB3	P28472	473 aa		12.9	□□□□□ -0.34
SF1-206	ENST00000413725	DUSP3	P51452	185 aa	Predicted RBP	12.9	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms