RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 TTC23Q5W5X9 447 aa10.59□□□□□ -0.71
CLIP4-204ENST00000404424 TMEM214Q6NUQ4 689 aaKnown RBP10.59□□□□□ -0.71
CLIP4-204ENST00000404424 TMEM26Q6ZUK4 368 aa10.59□□□□□ -0.71
CLIP4-204ENST00000404424 FRA10AC1Q70Z53 315 aa10.59□□□□□ -0.71
CLIP4-204ENST00000404424 RALGPS2Q86X27 583 aaPredicted RBP10.59□□□□□ -0.71
CLIP4-204ENST00000404424 SMYD1Q8NB12 490 aa10.59□□□□□ -0.71
CLIP4-204ENST00000404424 SDCCAG3Q96C92 435 aa10.59□□□□□ -0.71
CLIP4-204ENST00000404424 PPP3R2Q96LZ3 170 aa10.59□□□□□ -0.71
CLIP4-204ENST00000404424 PPM1MQ96MI6 270 aa10.59□□□□□ -0.71
CLIP4-204ENST00000404424 FAM210AQ96ND0 272 aa10.59□□□□□ -0.71
CLIP4-204ENST00000404424 MUS81Q96NY9 551 aa10.59□□□□□ -0.71
CLIP4-204ENST00000404424 ING2Q9H160 280 aa10.59□□□□□ -0.71
CLIP4-204ENST00000404424 RHBDL2Q9NX52 303 aa10.59□□□□□ -0.71
CLIP4-204ENST00000404424 LMCD1Q9NZU5 365 aa10.59□□□□□ -0.71
CLIP4-204ENST00000404424 AP3M1Q9Y2T2 418 aa10.59□□□□□ -0.71
CLIP4-204ENST00000404424 ASB1Q9Y576 335 aa10.59□□□□□ -0.71
CLIP4-204ENST00000404424 PCDHB1Q9Y5F3 818 aa10.59□□□□□ -0.71
CLIP4-204ENST00000404424 H0Y858 1186 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 KATNA1O75449 491 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 S100BP04271 92 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-204ENST00000404424 SOX11P35716 441 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 CLCN7P51798 805 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 ARPP19P56211 112 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 GTF2H2Q13888 395 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 AP5B1Q2VPB7 878 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 OTUD3Q5T2D3 398 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-204ENST00000404424 GTF2H2CQ6P1K8 395 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 RNF165Q6ZSG1 346 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 GOLGA7Q7Z5G4 137 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 THAP5Q7Z6K1 395 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 ZNF554Q86TJ5 538 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 ZDHHC13Q8IUH4 622 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 CLEC4FQ8N1N0 589 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 OR52E4Q8NGH9 312 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 TBC1D15Q8TC07 691 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 C2orf15Q8WU43 125 aaKnown RBP10.58□□□□□ -0.72
CLIP4-204ENST00000404424 POP5Q969H6 163 aaKnown RBP10.58□□□□□ -0.72
CLIP4-204ENST00000404424 TMBIM1Q969X1 311 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 MAGED4Q96JG8 741 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 EXOC2Q96KP1 924 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 CDK15Q96Q40 435 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 ZBED2Q9BTP6 218 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 P2RY12Q9H244 342 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 ACTL8Q9H568 366 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 PIF1Q9H611 641 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 HPS4Q9NQG7 708 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 TLR9Q9NR96 1032 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 SMPD4Q9NXE4 827 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 ZNF711Q9Y462 761 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 A0A1W2PPW3 197 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 C16orf96A6NNT2 1141 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 ABCB7O75027 752 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 MT-ND1P03886 318 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 RHOCP08134 193 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 HOXB6P17509 224 aaKnown RBP10.58□□□□□ -0.72
CLIP4-204ENST00000404424 EEF1B2P24534 225 aaKnown RBP10.58□□□□□ -0.72
CLIP4-204ENST00000404424 ARL1P40616 181 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-204ENST00000404424 MTPNP58546 118 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 NEDD8Q15843 81 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 MOGQ16653 247 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 CERS6Q6ZMG9 384 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 CHST9Q7L1S5 443 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 C8orf59Q8N0T1 100 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-204ENST00000404424 TTC30BQ8N4P2 665 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 GLB1L3Q8NCI6 653 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-204ENST00000404424 OR4F6Q8NGB9 312 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 TRIB2Q92519 343 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 ZNF583Q96ND8 569 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 ZBTB18Q99592 522 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 SH3GL1Q99961 368 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 TTLL2Q9BWV7 592 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 SOX17Q9H6I2 414 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-204ENST00000404424 CHCHD3Q9NX63 227 aaKnown RBP10.58□□□□□ -0.72
CLIP4-204ENST00000404424 PCDHGC4Q9Y5F7 938 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 V9GYQ6 96 aa10.58□□□□□ -0.72
CLIP4-204ENST00000404424 GREB1Q4ZG55 1949 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 OR7A17O14581 309 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 PRMT5O14744 637 aaPredicted RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 RAD51BO15315 384 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 CBFA2T3O75081 653 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 SEC14L2O76054 403 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 CCNA2P20248 432 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 NFKBIAP25963 317 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 CST5P28325 142 aaPredicted RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 MTHFRP42898 656 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 HTR6P50406 440 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 CACNG1Q06432 222 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 ZNF177Q13360 481 aaPredicted RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 SELPLGQ14242 412 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 KIAA0040Q15053 153 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 FGD3Q5JSP0 725 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 HABP4Q5JVS0 413 aaKnown RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 CCSAPQ6IQ19 270 aaPredicted RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 TAS2R42Q7RTR8 314 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 MILR1Q7Z6M3 343 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 STK32CQ86UX6 486 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 SVOPLQ8N434 492 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 DCBLD1Q8N8Z6 715 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 OR2T12Q8NG77 320 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms