RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 OGFRQ9NZT2 677 aa17.8■□□□□ 0.44
PTPRN2-204ENST00000404321 FOXJ2Q9P0K8 574 aa17.8■□□□□ 0.44
PTPRN2-204ENST00000404321 BPTFQ12830 3046 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 TRBV5-4A0A0C4DH59 114 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 HGSO14964 777 aaPredicted RBP17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 KIF5CO60282 957 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 UBXN7O94888 489 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 AMD1P17707 334 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 ADRA1DP25100 572 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 CSTF2P33240 577 aaKnown RBP eCLIP17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 MLLT3P42568 568 aaPredicted RBP17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 GFERP55789 205 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 TRA2AQ13595 282 aaKnown RBP eCLIP17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 METRNLQ641Q3 311 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 WDR74Q6RFH5 385 aaPredicted RBP17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 XKR5Q6UX68 686 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 FAM129CQ86XR2 697 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 CFAP206Q8IYR0 622 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 RASGEF1CQ8N431 466 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 HDAC10Q969S8 669 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 PMEPA1Q969W9 287 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 MAGOHBQ96A72 148 aaKnown RBP17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 INSM2Q96T92 566 aaPredicted RBP17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 DPYSL5Q9BPU6 564 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 OCIAD1Q9NX40 245 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 TCAF1Q9Y4C2 921 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 TCRBV7S3A2A0A539 114 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 C9orf172C9J069 976 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 ZNF185O15231 689 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 GOT2P00505 430 aaKnown RBP17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 SLC35G4P0C7Q5 338 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 FGF3P11487 239 aaPredicted RBP17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 PRLHRP49683 370 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 PDZD3Q86UT5 571 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 ZFAND4Q86XD8 727 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 AGBL5Q8NDL9 886 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 PPHLN1Q8NEY8 458 aaKnown RBP17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 OR6P1Q8NGX9 317 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 RSC1A1Q92681 617 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 ART4Q93070 314 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 PDLIM2Q96JY6 352 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 TGM7Q96PF1 710 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 RANBP9Q96S59 729 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 OSBPL9Q96SU4 736 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 UCK1Q9HA47 277 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 EIF2B3Q9NR50 452 aaKnown RBP17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 CHRAC1Q9NRG0 131 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 PCDHGA7Q9Y5G6 932 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 PRSS21Q9Y6M0 314 aa17.79■□□□□ 0.44
PTPRN2-204ENST00000404321 ITPR1Q14643 2758 aa17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 IGLV3-16A0A075B6K0 115 aa17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 EFCAB7A8K855 629 aa17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 PGRMC1O00264 195 aaKnown RBP17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 KRT14P02533 472 aa17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 MTHFD1P11586 935 aaKnown RBP17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 PSMA3P25788 255 aa17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 FOXN2P32314 431 aa17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 LEPRP48357 1165 aaKnown RBP17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 GPS1Q13098 491 aa17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 TGIF1Q15583 401 aa17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 C4orf22Q6V702 233 aa17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 HEXDCQ8WVB3 486 aa17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 LINC00615Q96LM1 132 aaPredicted RBP17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 C12orf66Q96MD2 445 aa17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 PYCARDQ9ULZ3 195 aa17.78■□□□□ 0.44
PTPRN2-204ENST00000404321 ZFC3H1O60293 1989 aaKnown RBP17.77■□□□□ 0.44
PTPRN2-204ENST00000404321 NVLO15381 856 aaKnown RBP17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 CAPN5O15484 640 aaPredicted RBP17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 OR1I1O60431 355 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 PREPP48147 710 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 PRAMEP78395 509 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 CLN3Q13286 438 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 LAMB3Q13751 1172 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 GSE1Q14687 1217 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 PLCL1Q15111 1095 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 AFTPHQ6ULP2 937 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 PLXDC1Q8IUK5 500 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 HM13Q8TCT9 377 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 RMDN2Q96LZ7 410 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 CCM2Q9BSQ5 444 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 EPB41L1Q9H4G0 881 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 CPNE5Q9HCH3 593 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 SLC39A1Q9NY26 324 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 PDP2Q9P2J9 529 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 ACSL5Q9ULC5 683 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 SNX12Q9UMY4 172 aa17.77■□□□□ 0.43
PTPRN2-204ENST00000404321 ZNF106Q9H2Y7 1883 aaKnown RBP17.76■□□□□ 0.43
PTPRN2-204ENST00000404321 KIF1CO43896 1103 aaKnown RBP17.76■□□□□ 0.43
PTPRN2-204ENST00000404321 MGAT1P26572 445 aa17.76■□□□□ 0.43
PTPRN2-204ENST00000404321 COILP38432 576 aaPredicted RBP17.76■□□□□ 0.43
PTPRN2-204ENST00000404321 PPP1CAP62136 330 aa17.76■□□□□ 0.43
PTPRN2-204ENST00000404321 CXADRP78310 365 aa17.76■□□□□ 0.43
PTPRN2-204ENST00000404321 SEMA3AQ14563 771 aa17.76■□□□□ 0.43
PTPRN2-204ENST00000404321 BROXQ5VW32 411 aa17.76■□□□□ 0.43
PTPRN2-204ENST00000404321 ANKRD22Q5VYY1 191 aa17.76■□□□□ 0.43
PTPRN2-204ENST00000404321 IRGCQ6NXR0 463 aa17.76■□□□□ 0.43
PTPRN2-204ENST00000404321 NAPRTQ6XQN6 538 aa17.76■□□□□ 0.43
PTPRN2-204ENST00000404321 ZNF534Q76KX8 674 aa17.76■□□□□ 0.43
PTPRN2-204ENST00000404321 ARHGAP22Q7Z5H3 698 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms