RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 OCIAD1Q9NX40 245 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 HAO2Q9NYQ3 351 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 SMARCAL1Q9NZC9 954 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 SELENONQ9NZV5 590 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 BCCIPQ9P287 314 aaKnown RBP eCLIP2.67□□□□□ -1.98
CD47-203ENST00000398258 SIX4Q9UIU6 781 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 TUBE1Q9UJT0 475 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 PCDHGA5Q9Y5G8 931 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 NFS1Q9Y697 457 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 A0A1B0GVY2 172 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 A0A1W2PPM1 405 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 OR2M5A3KFT3 312 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 TMEM221A6NGB7 291 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 ZNF587BE7ETH6 402 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 H0YIN7 160 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 TMEM189-UBE2V1I3L0A0 370 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 TO15178 435 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 SPRY1O43609 319 aaPredicted RBP2.66□□□□□ -1.98
CD47-203ENST00000398258 OR10H2O60403 315 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 PRAMEF11O60813 436 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 RECQL5O94762 991 aaPredicted RBP2.66□□□□□ -1.98
CD47-203ENST00000398258 CLDN14O95500 239 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 LINGO3P0C6S8 592 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 IFNAR1P17181 557 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 CPT2P23786 658 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 CORO1AP31146 461 aaKnown RBP2.66□□□□□ -1.98
CD47-203ENST00000398258 HOXC8P31273 242 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 DSCR9P59020 149 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 KRT83P78385 493 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 CDK3Q00526 305 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 KIF5AQ12840 1032 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 UBE2V1Q13404 147 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 ZNF234Q14588 700 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 SNAPC1Q16533 368 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 CALCRLQ16602 461 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 ALDH1L2Q3SY69 923 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 XKR9Q5GH70 373 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 RGMBQ6NW40 437 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 IL27RAQ6UWB1 636 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 LINGO4Q6UY18 593 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 ZNF704Q6ZNC4 412 aaPredicted RBP2.66□□□□□ -1.98
CD47-203ENST00000398258 CAMKMTQ7Z624 323 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 GPR180Q86V85 440 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 VSIG1Q86XK7 387 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 SLC5A8Q8N695 610 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 Q8NFD4 153 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 MOSPD2Q8NHP6 518 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 TBC1D16Q8TBP0 767 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 UTP15Q8TED0 518 aaKnown RBP2.66□□□□□ -1.98
CD47-203ENST00000398258 TMED6Q8WW62 240 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 PIGTQ969N2 578 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 PTERQ96BW5 349 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 ERLEC1Q96DZ1 483 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 LINC00615Q96LM1 132 aaPredicted RBP2.66□□□□□ -1.98
CD47-203ENST00000398258 TTC14Q96N46 770 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 MS4A10Q96PG2 267 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 PCYT2Q99447 389 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 MTERF1Q99551 399 aaKnown RBP2.66□□□□□ -1.98
CD47-203ENST00000398258 CMKLR1Q99788 373 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 SEMA3CQ99985 751 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 C16orf70Q9BSU1 422 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 ABHD6Q9BV23 337 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 ST6GALNAC4Q9H4F1 302 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 NOL11Q9H8H0 719 aaKnown RBP2.66□□□□□ -1.98
CD47-203ENST00000398258 KLHL1Q9NR64 748 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 PRMT7Q9NVM4 692 aaPredicted RBP2.66□□□□□ -1.98
CD47-203ENST00000398258 TAS2R14Q9NYV8 317 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 KLHL20Q9Y2M5 609 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 AMDHD2Q9Y303 409 aa2.66□□□□□ -1.98
CD47-203ENST00000398258 ZCWPW2A0A1B0GU75 182 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 CTAGE9A4FU28 777 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 URADA6NGE7 173 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 ANKRD66B4E2M5 251 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 PTGESO14684 152 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 CLGNO14967 610 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 SSX4O60224 188 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 LDB3O75112 727 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 MED24O75448 989 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 KDM4BO94953 1096 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 CAMTA2O94983 1202 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 SIX3O95343 332 aaPredicted RBP2.65□□□□□ -1.99
CD47-203ENST00000398258 PMS2P2O95744 297 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 GGPS1O95749 300 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 HSPA4LO95757 839 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 AFPP02771 609 aaKnown RBP2.65□□□□□ -1.99
CD47-203ENST00000398258 CTAGE8P0CG41 777 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 FCGR1AP12314 374 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 GM2AP17900 193 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 USP8P40818 1118 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 RAB28P51157 221 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 CSE1LP55060 971 aaKnown RBP2.65□□□□□ -1.99
CD47-203ENST00000398258 CDH13P55290 713 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 TUBA1BP68363 451 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 PPP2R2BQ00005 443 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 PDE1BQ01064 536 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 DDR1Q08345 913 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 DLG1Q12959 904 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 MYBPHQ13203 477 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 SCARB2Q14108 478 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 COG2Q14746 738 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms