RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 IL1R2P27930 398 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 GSDMDP57764 484 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 KCNK10P57789 538 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 DCDC1P59894 354 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 PPP1CAP62136 330 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 LTBQ06643 244 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 CDC16Q13042 620 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 GPS2Q13227 327 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 KCNAB1Q14722 419 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 ASIC2Q16515 512 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 ZNF569Q5MCW4 686 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 CDKAL1Q5VV42 579 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 PDPK2PQ6A1A2 396 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 KLHL35Q6PF15 583 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 CRTC3Q6UUV7 619 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 FAM180AQ6UWF9 173 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 RPTNQ6XPR3 784 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 TMEM126BQ8IUX1 230 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 GALNT16Q8N428 558 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 D2HGDHQ8N465 521 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 CHDHQ8NE62 594 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-203ENST00000397378 LPCAT1Q8NF37 534 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 OR8K5Q8NH50 307 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 ARRDC2Q8TBH0 407 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 ENOX1Q8TC92 643 aaKnown RBP9.2□□□□□ -0.94
NEDD9-203ENST00000397378 FATE1Q969F0 183 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 GLYATL1Q969I3 302 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 CXorf40BQ96DE9 158 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 PCMTD1Q96MG8 357 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-203ENST00000397378 WDR77Q9BQA1 342 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-203ENST00000397378 ZSCAN5AQ9BUG6 496 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 SPATA16Q9BXB7 569 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 NLNQ9BYT8 704 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 ZNF552Q9H707 407 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-203ENST00000397378 ZBTB20Q9HC78 741 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-203ENST00000397378 ARFGAP3Q9NP61 516 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 HAUS2Q9NVX0 235 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 DNAJC16Q9Y2G8 782 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 CSAG2Q9Y5P2 127 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 TLCD2A6NGC4 264 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 MATN3O15232 486 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 VEGFDO43915 354 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 SCRG1O75711 98 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 FERP16591 822 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 IDSP22304 550 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 IL4RP24394 825 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 OTX2P32243 289 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 ZNF165P49910 485 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 TUBB4BP68371 445 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 HSD11B2P80365 405 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 Q0VFX4 171 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 GALNT2Q10471 571 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 TUBB2AQ13885 445 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 SEPT7Q16181 437 aaKnown RBP9.19□□□□□ -0.94
NEDD9-203ENST00000397378 HIF1AQ16665 826 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 QPCTQ16769 361 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 PLEKHS1Q5SXH7 462 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 ZNF648Q5T619 568 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-203ENST00000397378 TIGD7Q6NT04 549 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-203ENST00000397378 MTFR2Q6P444 385 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 XKRXQ6PP77 449 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 IRF2BP2Q7Z5L9 587 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 RAB43Q86YS6 212 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 ZNF547Q8IVP9 402 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 DSELQ8IZU8 1212 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 CARFQ8N187 725 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 TRAM1L1Q8N609 369 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 SLC38A9Q8NBW4 561 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 TEKT4Q8WW24 435 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 ZNF501Q96CX3 271 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-203ENST00000397378 EID2BQ96D98 161 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 FER1L6-AS2Q96M78 137 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 TSGA13Q96PP4 275 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 MAP3K3Q99759 626 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 SLX1AQ9BQ83 275 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 TUBB2BQ9BVA1 445 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 CLSTN2Q9H4D0 955 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 PCDH18Q9HCL0 1135 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 SEMA3GQ9NS98 782 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 KCND1Q9NSA2 647 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.19□□□□□ -0.94
NEDD9-203ENST00000397378 OLAHQ9NV23 265 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 DTLQ9NZJ0 730 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 SH3BGRL2Q9UJC5 107 aa9.19□□□□□ -0.94
NEDD9-203ENST00000397378 LGALS16A8MUM7 142 aa9.18□□□□□ -0.94
NEDD9-203ENST00000397378 TMCO5BA8MYB1 307 aa9.18□□□□□ -0.94
NEDD9-203ENST00000397378 MEN1O00255 615 aa9.18□□□□□ -0.94
NEDD9-203ENST00000397378 FANCGO15287 622 aa9.18□□□□□ -0.94
NEDD9-203ENST00000397378 KCNJ13O60928 360 aa9.18□□□□□ -0.94
NEDD9-203ENST00000397378 ZBTB11O95625 1053 aaPredicted RBP9.18□□□□□ -0.94
NEDD9-203ENST00000397378 CAPN1P07384 714 aa9.18□□□□□ -0.94
NEDD9-203ENST00000397378 RARAP10276 462 aa9.18□□□□□ -0.94
NEDD9-203ENST00000397378 GZMAP12544 262 aa9.18□□□□□ -0.94
NEDD9-203ENST00000397378 VCLP18206 1134 aa9.18□□□□□ -0.94
NEDD9-203ENST00000397378 CCNCP24863 283 aa9.18□□□□□ -0.94
NEDD9-203ENST00000397378 PBX1P40424 430 aa9.18□□□□□ -0.94
NEDD9-203ENST00000397378 HALP42357 657 aa9.18□□□□□ -0.94
NEDD9-203ENST00000397378 TSFMP43897 325 aaKnown RBP9.18□□□□□ -0.94
NEDD9-203ENST00000397378 ARL4DP49703 201 aa9.18□□□□□ -0.94
NEDD9-203ENST00000397378 DRG2P55039 364 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms