RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 IRGCQ6NXR0 463 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 ALKBH5Q6P6C2 394 aaKnown RBP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 CRTC3Q6UUV7 619 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 FAM92BQ6ZTR7 304 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 TMEM135Q86UB9 458 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 NT5DC3Q86UY8 548 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 KMT5CQ86Y97 462 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 PQLC3Q8N755 202 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 OR8K5Q8NH50 307 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 CPT1CQ8TCG5 803 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 CT55Q8WUE5 264 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 ZFPM2Q8WW38 1151 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 RSC1A1Q92681 617 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 GTPBP3Q969Y2 492 aaKnown RBP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 IMP4Q96G21 291 aaKnown RBP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 CALR3Q96L12 384 aaKnown RBP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 ZNF830Q96NB3 372 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 TTC25Q96NG3 672 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 NAP1L5Q96NT1 182 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 RNF157Q96PX1 679 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 VPS35Q96QK1 796 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 BRD8Q9H0E9 1235 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 SLC25A51Q9H1U9 297 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 ACTL8Q9H568 366 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 PLEKHB1Q9UF11 243 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 FARSAQ9Y285 508 aaKnown RBP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 PCDHGB7Q9Y5F8 929 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 DNMT3AQ9Y6K1 912 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 SPENQ96T58 3664 aaKnown RBP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 A0A087X0T9 212 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 ZNF487B1APH4 448 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 DDAH2O95865 285 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 PDGFAP04085 211 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 FAM228BP0C875 321 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 FOLR1P15328 257 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 LPOP22079 712 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-208ENST00000397204 KDELR1P24390 212 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 ARL4DP49703 201 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 PGDP52209 483 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 DRG2P55039 364 aaKnown RBP8.57□□□□□ -1.04
CAPN3-208ENST00000397204 HSD11B2P80365 405 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 TYRO3Q06418 890 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 PPIDQ08752 370 aaKnown RBP8.57□□□□□ -1.04
CAPN3-208ENST00000397204 DMPKQ09013 629 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 TUBB3Q13509 450 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 GALNT3Q14435 633 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 NFKBIBQ15653 356 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 SLC14A2Q15849 920 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 SEPT7Q16181 437 aaKnown RBP8.57□□□□□ -1.04
CAPN3-208ENST00000397204 ZDHHC20Q5W0Z9 365 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 ALS2CLQ60I27 953 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 FAM199XQ6PEV8 388 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-208ENST00000397204 C11orf96Q7Z7L8 435 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 SYVN1Q86TM6 617 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 AMZ2Q86W34 360 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 HPS6Q86YV9 775 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 SSC4DQ8WTU2 575 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 TADA1Q96BN2 335 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 GBP4Q96PP9 640 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 CD180Q99467 661 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 SLC25A23Q9BV35 468 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 TRIM55Q9BYV6 548 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 AKIRIN1Q9H9L7 192 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-208ENST00000397204 FGF21Q9NSA1 209 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 KCND1Q9NSA2 647 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 TMPRSS11EQ9UL52 423 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 ZNF711Q9Y462 761 aa8.57□□□□□ -1.04
CAPN3-208ENST00000397204 UBA6A0AVT1 1052 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-208ENST00000397204 A6NJY4 79 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 GOLGA6L22H0YM25 854 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 POP7O75817 140 aaKnown RBP8.56□□□□□ -1.04
CAPN3-208ENST00000397204 DNAJB5O75953 348 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 TIAF1O95411 115 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 NDST3O95803 873 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 SERPINC1P01008 464 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 PIRTP0C851 137 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 ZFXP17010 805 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-208ENST00000397204 GNLYP22749 145 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 HMGCLP35914 325 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 CCL11P51671 97 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 TAS2R40P59535 323 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 TUBB4BP68371 445 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 ZBED6P86452 979 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 AP1B1Q10567 949 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 ZBTB17Q13105 803 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 TUBB2AQ13885 445 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 GTF2H3Q13889 308 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 PDK1Q15118 436 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 RPE65Q16518 533 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 PLA2G4EQ3MJ16 856 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 ANO6Q4KMQ2 910 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 ATP13A5Q4VNC0 1218 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 KHDC1Q4VXA5 237 aaKnown RBP8.56□□□□□ -1.04
CAPN3-208ENST00000397204 ZFYVE27Q5T4F4 411 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 ZNF517Q6ZMY9 492 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-208ENST00000397204 VSIG1Q86XK7 387 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 TRAPPC5Q8IUR0 188 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 CARFQ8N187 725 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms