RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TPGS2Q68CL5 300 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 ENPP7Q6UWV6 458 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 TNFRSF25Q93038 417 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 PLOD3O60568 738 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 PSIP1O75475 530 aaKnown RBP10.27□□□□□ -0.77
COL4A6-203ENST00000394872 ACADLP28330 430 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 HNRNPH3P31942 346 aaKnown RBP10.27□□□□□ -0.77
COL4A6-203ENST00000394872 RPP38P78345 283 aaKnown RBP10.27□□□□□ -0.77
COL4A6-203ENST00000394872 SMCO1Q147U7 214 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 ARSIQ5FYB1 569 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 SPATA9Q9BWV2 254 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 GPR88Q9GZN0 384 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 PNPLA8Q9NP80 782 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 ETAA1Q9NY74 926 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 RIIAD1A6NNX1 92 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 MAP2K7O14733 419 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 PGM3O95394 542 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 FADS2O95864 444 aaKnown RBP10.27□□□□□ -0.77
COL4A6-203ENST00000394872 ARHGDIBP52566 201 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 RIPK1Q13546 671 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 VPS26BQ4G0F5 336 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 AUTS2Q8WXX7 1259 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 SMPDL3BQ92485 455 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 TP53INP1Q96A56 240 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 CACNG4Q9UBN1 327 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 CORO1CQ9ULV4 474 aaPredicted RBP10.27□□□□□ -0.77
COL4A6-203ENST00000394872 CAMTA1Q9Y6Y1 1673 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 C9IYK1 514 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 TNFRSF11BO00300 401 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 PAX7P23759 505 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 RYKP34925 604 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 MSX2P35548 267 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-203ENST00000394872 MNDAP41218 407 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 NR1H2P55055 460 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 GJA9P57773 515 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 SEMG2Q02383 582 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 SMU1Q2TAY7 513 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 PUS10Q3MIT2 529 aaKnown RBP10.26□□□□□ -0.77
COL4A6-203ENST00000394872 PERM1Q5SV97 790 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 DENND5AQ6IQ26 1287 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 ZCCHC12Q6PEW1 402 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-203ENST00000394872 BRSK1Q8TDC3 778 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 HCAR2Q8TDS4 363 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CPT1BQ92523 772 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 SDCBP2Q9H190 292 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CLK4Q9HAZ1 481 aaKnown RBP10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CLEC4AQ9UMR7 237 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 B4DGG1 531 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 AOC2O75106 756 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 WFS1O76024 890 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 SERPINA1P01009 418 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 TCF4P15884 667 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CPN2P22792 545 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 NSG1P42857 185 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 DNASE1L1P49184 302 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 FUT2Q10981 343 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 HKDC1Q2TB90 917 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 DCST1Q5T197 706 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 RANBP3LQ86VV4 465 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-203ENST00000394872 MFSD3Q96ES6 412 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CDH7Q9ULB5 785 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 DHRS7Q9Y394 339 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 ARL5AQ9Y689 179 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 ELOVL7A1L3X0 281 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CCL5P13501 91 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CCKBRP32239 447 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CBX5P45973 191 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CCR10P46092 362 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 PPP2R2BQ00005 443 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 SLC10A6Q3KNW5 377 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 TIGD5Q53EQ6 642 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 RNASE12Q5GAN4 147 aaKnown RBP10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CXorf57Q6NSI4 855 aaKnown RBP10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CNKSR3Q6P9H4 555 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 AMZ2Q86W34 360 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CRYBG2Q8N1P7 616 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 RASGEF1CQ8N431 466 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 SCAMP5Q8TAC9 235 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 DPYSL5Q9BPU6 564 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 MCCC2Q9HCC0 563 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 DNAJC28Q9NX36 388 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 ASB3Q9Y575 518 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 SLIT3O75094 1523 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CHST10O43529 356 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 ADH5P11766 374 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CCNFP41002 786 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 TAS2R50P59544 299 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 ZNF280AP59817 542 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-203ENST00000394872 RASGRP3Q8IV61 690 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CPNE9Q8IYJ1 553 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 PLGRKTQ9HBL7 147 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 CCDC162PA2VCL2 907 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 C2orf71A6NGG8 1288 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 EDF1O60869 148 aaKnown RBP10.26□□□□□ -0.77
COL4A6-203ENST00000394872 C9P02748 559 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 PTGER3P43115 390 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 STARP49675 285 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 TLE2Q04725 743 aa10.26□□□□□ -0.77
COL4A6-203ENST00000394872 DCTN2Q13561 401 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms