RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 SAMHD1Q9Y3Z3 626 aaKnown RBP15.93■□□□□ 0.14
PCDH1-203ENST00000394536 GNG14A0A1W2PPG7 69 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 TRIP4Q15650 581 aaPredicted RBP15.92■□□□□ 0.14
PCDH1-203ENST00000394536 KDELC1Q6UW63 502 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 TMEM207Q6UWW9 146 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 ZNF598Q86UK7 904 aaKnown RBP15.92■□□□□ 0.14
PCDH1-203ENST00000394536 CARM1Q86X55 608 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 ADGRG5Q8IZF4 528 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 ARL10Q8N8L6 244 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 OR4F6Q8NGB9 312 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 FAM210AQ96ND0 272 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 DNMT3LQ9UJW3 386 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 ST14Q9Y5Y6 855 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 WNK3Q9BYP7 1800 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 RFXANKO14593 260 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 XPNPEP2O43895 674 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 MGEA5O60502 916 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 CKMP06732 381 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 HTR7P34969 479 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 HTR6P50406 440 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 EEFSECP57772 596 aaKnown RBP15.92■□□□□ 0.14
PCDH1-203ENST00000394536 DGUOKQ16854 277 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 TPGS1Q6ZTW0 290 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 GPR180Q86V85 440 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 MYRFLQ96LU7 910 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 RPF2Q9H7B2 306 aaKnown RBP15.92■□□□□ 0.14
PCDH1-203ENST00000394536 MRM3Q9HC36 420 aaKnown RBP15.92■□□□□ 0.14
PCDH1-203ENST00000394536 ATAD3AQ9NVI7 634 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 KNL1Q8NG31 2342 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 LCHNA4D1U4 455 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 XYLBO75191 536 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 BMP10O95393 424 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 OGNP20774 298 aaKnown RBP15.92■□□□□ 0.14
PCDH1-203ENST00000394536 SPANXN4Q5MJ08 99 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 CNTN4Q8IWV2 1026 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 LEMD2Q8NC56 503 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 NCSTNQ92542 709 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 HTRA1Q92743 480 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 HPS1Q92902 700 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 PYCR2Q96C36 320 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 PANX1Q96RD7 426 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 LRTM1Q9HBL6 345 aa15.92■□□□□ 0.14
PCDH1-203ENST00000394536 FAM32AQ9Y421 112 aaKnown RBP15.92■□□□□ 0.14
PCDH1-203ENST00000394536 LTBP4Q8N2S1 1624 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 CXCR6O00574 342 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 TRIM24O15164 1050 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 AP1G1O43747 822 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 ASGR1P07306 291 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 ALPIP09923 528 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 MAD2L1Q13257 205 aaPredicted RBP15.91■□□□□ 0.14
PCDH1-203ENST00000394536 TGFBIQ15582 683 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 ZNF829Q3KNS6 432 aaPredicted RBP15.91■□□□□ 0.14
PCDH1-203ENST00000394536 ZNF467Q7Z7K2 595 aaPredicted RBP15.91■□□□□ 0.14
PCDH1-203ENST00000394536 TMEM199Q8N511 208 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 SLCO4A1Q96BD0 722 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 NSMCE3Q96MG7 304 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 USE1Q9NZ43 259 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 PTBP2Q9UKA9 531 aaKnown RBP15.91■□□□□ 0.14
PCDH1-203ENST00000394536 TTC3P53804 2025 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 PHIPQ8WWQ0 1821 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 TMX2-CTNND1H3BSU7 103 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 BCKDKO14874 412 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 ZSCAN9O15535 394 aaPredicted RBP15.91■□□□□ 0.14
PCDH1-203ENST00000394536 PAPSS2O95340 614 aaPredicted RBP15.91■□□□□ 0.14
PCDH1-203ENST00000394536 SERPINA1P01009 418 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 DGKAP23743 735 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 MZF1P28698 734 aaPredicted RBP15.91■□□□□ 0.14
PCDH1-203ENST00000394536 ALDH7A1P49419 539 aaKnown RBP15.91■□□□□ 0.14
PCDH1-203ENST00000394536 PRIM2P49643 509 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 PURAQ00577 322 aaKnown RBP15.91■□□□□ 0.14
PCDH1-203ENST00000394536 PLD1Q13393 1074 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 PTPRRQ15256 657 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 TBC1D25Q3MII6 688 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 INTS11Q5TA45 600 aaKnown RBP15.91■□□□□ 0.14
PCDH1-203ENST00000394536 SYT12Q8IV01 421 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 MCOLN3Q8TDD5 553 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 MED8Q96G25 268 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 REXO5Q96IC2 774 aaKnown RBP15.91■□□□□ 0.14
PCDH1-203ENST00000394536 SDR39U1Q9NRG7 319 aaPredicted RBP15.91■□□□□ 0.14
PCDH1-203ENST00000394536 FCF1Q9Y324 198 aaKnown RBP15.91■□□□□ 0.14
PCDH1-203ENST00000394536 PCNTO95613 3336 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 SH3PXD2BA1X283 911 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 MBLAC1A4D2B0 266 aaPredicted RBP15.91■□□□□ 0.14
PCDH1-203ENST00000394536 MYADML2A6NDP7 307 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 RASAL1O95294 804 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 APOA1P02647 267 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 ALOX12P18054 663 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 INHBEP58166 350 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 BCL2L1Q07817 233 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 PSAPL1Q6NUJ1 521 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 C11orf74Q86VG3 221 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 UMODL1-AS1Q8N2C9 162 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 UBXN10Q96LJ8 280 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 ARMC1Q9NVT9 282 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 GTF2IRD1Q9UHL9 959 aa15.91■□□□□ 0.14
PCDH1-203ENST00000394536 LDB2O43679 373 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 PRAMEF1O95521 474 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 CASP9P55211 416 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 NHSL2Q5HYW2 709 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 SMYD5Q6GMV2 418 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms