RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 KCNJ11Q14654 390 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 ANKRD22Q5VYY1 191 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 LRRC8BQ6P9F7 803 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 SYT10Q6XYQ8 523 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 RBM44Q6ZP01 1051 aaKnown RBP9.08□□□□□ -0.96
HMGN1-202ENST00000380747 ZNF534Q76KX8 674 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 NLRP9Q7RTR0 991 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 SERPINA9Q86WD7 417 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 C17orf82Q86X59 251 aaPredicted RBP9.08□□□□□ -0.96
HMGN1-202ENST00000380747 CYP4X1Q8N118 509 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 OR6P1Q8NGX9 317 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 SLC37A2Q8TED4 501 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 HEXDCQ8WVB3 486 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 CPT1BQ92523 772 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 HDAC10Q969S8 669 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 SGF29Q96ES7 293 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 DEPDC7Q96QD5 511 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 IL22Q9GZX6 179 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 LRRN3Q9H3W5 708 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 STN1Q9H668 368 aaKnown RBP9.08□□□□□ -0.96
HMGN1-202ENST00000380747 PRDM8Q9NQV8 689 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 CHRAC1Q9NRG0 131 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 PGPEP1Q9NXJ5 209 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 ZDHHC3Q9NYG2 299 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 FAM8A1Q9UBU6 413 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 NEU2Q9Y3R4 380 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 SCN8AQ9UQD0 1980 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 TRBV5-4A0A0C4DH59 114 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 TEX51A0A1B0GUA7 166 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 AGAP14A8MT82 685 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 ZW10O43264 779 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 KCNJ13O60928 360 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 AVILO75366 819 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 CSO75390 466 aaKnown RBP9.07□□□□□ -0.96
HMGN1-202ENST00000380747 TMEM63AO94886 807 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 PRB1P04280 392 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 F3P13726 295 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 IDSP22304 550 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 PSMA3P25788 255 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 ACRV1P26436 265 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 RPL10P27635 214 aaKnown RBP9.07□□□□□ -0.96
HMGN1-202ENST00000380747 ALDH4A1P30038 563 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 FOXN2P32314 431 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 PTGIRP43119 386 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 MAGEA6P43360 314 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 CLCNKAP51800 687 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 DRG2P55039 364 aaKnown RBP9.07□□□□□ -0.96
HMGN1-202ENST00000380747 OR1D5P58170 312 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 B4GALNT1Q00973 533 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 DR1Q01658 176 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 PTK6Q13882 451 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 SPIDRQ14159 915 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 DBN1Q16643 649 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 AMZ1Q400G9 498 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 CDCP2Q5VXM1 449 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 CASC4Q6P4E1 433 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 IYDQ6PHW0 289 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 AFTPHQ6ULP2 937 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 SPRED1Q7Z699 444 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 C11orf96Q7Z7L8 435 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 ZNF605Q86T29 641 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 SLC9B2Q86UD5 537 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 AMZ2Q86W34 360 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 ZNF761Q86XN6 746 aaPredicted RBP9.07□□□□□ -0.96
HMGN1-202ENST00000380747 TRIM48Q8IWZ4 208 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 PIANPQ8IYJ0 282 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 ZNF843Q8N446 348 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 SFRP1Q8N474 314 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 BEND7Q8N7W2 519 aaPredicted RBP9.07□□□□□ -0.96
HMGN1-202ENST00000380747 DCBLD1Q8N8Z6 715 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.07□□□□□ -0.96
HMGN1-202ENST00000380747 OR13J1Q8NGT2 312 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 WDR48Q8TAF3 677 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.07□□□□□ -0.96
HMGN1-202ENST00000380747 ZNF514Q96K75 400 aaPredicted RBP9.07□□□□□ -0.96
HMGN1-202ENST00000380747 ZNF778Q96MU6 729 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 RUNDC3BQ96NL0 473 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 GFM1Q96RP9 751 aaKnown RBP9.07□□□□□ -0.96
HMGN1-202ENST00000380747 SYBUQ9NX95 663 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 RNF14Q9UBS8 474 aa9.07□□□□□ -0.96
HMGN1-202ENST00000380747 ATXN7L1Q9ULK2 861 aaPredicted RBP9.07□□□□□ -0.96
HMGN1-202ENST00000380747 COL12A1Q99715 3063 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 KIR2DS5A0A0G2JLQ3 304 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 A0A0G2JNG1 304 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 A0A1W2PQM1 296 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 A6NCN8 305 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 MGAT4DA6NG13 374 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 OR5K4A6NMS3 321 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 CCDC188H7C350 402 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 KIR2DS3K7RE56 304 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 PPM1DO15297 605 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 B4GAT1O43505 415 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 TCEA3O75764 348 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 VIPP01282 170 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 ATP1B2P14415 290 aaPredicted RBP9.06□□□□□ -0.96
HMGN1-202ENST00000380747 PNLIPP16233 465 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 NMBRP28336 390 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 HALP42357 657 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 MAPK9P45984 424 aa9.06□□□□□ -0.96
HMGN1-202ENST00000380747 HHEXQ03014 270 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms