RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 MIEF1Q9NQG6 463 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ARL8BQ9NVJ2 186 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SARDHQ9UL12 918 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF99A8MXY4 864 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 TPP1O14773 563 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 GRAP2O75791 330 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 GRIA3P42263 894 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 CAPN13Q6MZZ7 669 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 KCTD7Q96MP8 289 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ANKRA2Q9H9E1 313 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 CCDC167Q9P0B6 97 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 MTRRQ9UBK8 725 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 DAPK2Q9UIK4 370 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 A0A1B0GVM2 712 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 TCAF2A6NFQ2 919 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 PFKMP08237 780 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 CD63P08962 238 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 RBBP7Q16576 425 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 C6orf141Q5SZD1 244 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 MBLAC2Q68D91 279 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 OR2T5Q6IEZ7 315 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 OR2T29Q8NH02 315 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 GUCA1CO95843 209 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 DSG2Q14126 1118 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 PIGZQ86VD9 579 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SATL1Q86VE3 508 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 DNAJA4Q8WW22 397 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 GPR20Q99678 358 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SLC30A2Q9BRI3 323 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 OR2AG2A6NM03 316 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 CAPNS1P04632 268 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 TFE3P19532 575 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 LGI2Q8N0V4 545 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 MCFD2Q8NI22 146 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 CDC25CP30307 473 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 GRK4P32298 578 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 TRIQKQ629K1 86 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 RINLQ6ZS11 566 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 OFCC1Q8IZS5 231 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SLCO1B3Q9NPD5 702 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 IFNW1P05000 195 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SPATA31D3P0C874 917 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 FOXN2P32314 431 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 THEMIS2Q5TEJ8 643 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SPATA31D4Q6ZUB0 917 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 TRIM46Q7Z4K8 759 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 CUZD1Q86UP6 607 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 FAIMQ9NVQ4 179 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 NTMT1Q9BV86 223 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 GMPPBQ9Y5P6 360 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SPDYE16A6NNV3 312 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 TMEM189-UBE2V1I3L0A0 370 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ECHS1P30084 290 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 RBM34P42696 430 aaKnown RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 CREB5Q02930 508 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ZBTB6Q15916 424 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 PLA2G15Q8NCC3 412 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 KIDINS220Q9ULH0 1771 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 YES1P07947 543 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 RFC2P35250 354 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 CLVS2Q5SYC1 327 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 CLVS1Q8IUQ0 354 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ANKRD63C9JTQ0 380 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 HMGCLP35914 325 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 GJA8P48165 433 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 KANK2Q63ZY3 851 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 TMEM181Q9P2C4 612 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 FKBPLQ9UIM3 349 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ANO7Q6IWH7 933 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 RHPN2P1A8MT19 583 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 APOL3O95236 402 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 RHCEP18577 417 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 HOXD13P35453 343 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 CAND1Q86VP6 1230 aaKnown RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 TMEM199Q8N511 208 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 FRMD6Q96NE9 622 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 TFECO14948 347 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 PRNPP04156 253 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 LCP1P13796 627 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 RTL6Q6ICC9 239 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 RBM44Q6ZP01 1051 aaKnown RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 MRPL10Q7Z7H8 261 aaKnown RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 SLC2A14Q8TDB8 520 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 DIP2BQ9P265 1576 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 QRICH2Q9H0J4 1663 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 A0A075B6Q4 140 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 GPR17Q13304 367 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 RNF113BQ8IZP6 322 aaKnown RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 CBR4Q8N4T8 237 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 CPEB1Q9BZB8 566 aaKnown RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 DDTLA6NHG4 134 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 PRR5-ARHGAP8B1AHC4 643 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 NBNO60934 754 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 VEGFAP15692 232 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 SCAND1P57086 179 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ARHGAP8P85298 464 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF440Q8IYI8 595 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 CHPFQ8IZ52 775 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 CLDN22Q8N7P3 220 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 CKLFQ9UBR5 152 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms