RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 PFDN6O15212 129 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 NDUFS3O75489 264 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 GSTM1P09488 218 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 OR56A5P0C7T3 313 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 JUPP14923 745 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 PGAM1P18669 254 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 HALP42357 657 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 FASLGP48023 281 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 ARL4CP56559 192 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 GSTM4Q03013 218 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 THOC5Q13769 683 aaKnown RBP17.12■□□□□ 0.33
C6orf48-207ENST00000375642 HES3Q5TGS1 186 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 DUPD1Q68J44 220 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 NEPROQ6NW34 567 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 ZNF438Q7Z4V0 828 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 CCNJLQ8IV13 435 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 CFAP206Q8IYR0 622 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 HM13Q8TCT9 377 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 PWWP2AQ96N64 755 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 SARS2Q9NP81 518 aaKnown RBP17.12■□□□□ 0.33
C6orf48-207ENST00000375642 SCHIP1Q9P0W5 487 aaPredicted RBP17.12■□□□□ 0.33
C6orf48-207ENST00000375642 CPNE7Q9UBL6 633 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 FAM8A1Q9UBU6 413 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 PRSS21Q9Y6M0 314 aa17.12■□□□□ 0.33
C6orf48-207ENST00000375642 CTAGE15A4D2H0 777 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 PPM1DO15297 605 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 TP73O15350 636 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 BANF1O75531 89 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 TTC4O95801 387 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 MT-CO3P00414 261 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 FTH1P02794 183 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 RPLP0P05388 317 aaKnown RBP17.11■□□□□ 0.33
C6orf48-207ENST00000375642 CTAGE8P0CG41 777 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 BRAFP15056 766 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 XRCC1P18887 633 aaPredicted RBP17.11■□□□□ 0.33
C6orf48-207ENST00000375642 GPR3P46089 330 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 CLDN6P56747 220 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 HHEXQ03014 270 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 LONRF1Q17RB8 773 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.11■□□□□ 0.33
C6orf48-207ENST00000375642 C8orf74Q6P047 294 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 SPRED1Q7Z699 444 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 CTAGE6Q86UF2 777 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 TRIM48Q8IWZ4 208 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 CTAGE4Q8IX94 777 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.11■□□□□ 0.337e-9■■□□□ 13.4
C6orf48-207ENST00000375642 GPR150Q8NGU9 434 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 SH3KBP1Q96B97 665 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 LRRC39Q96DD0 335 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 TCF12Q99081 682 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 SLC38A3Q99624 504 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 SYNDIG1Q9H7V2 258 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 C20orf96Q9NUD7 363 aaPredicted RBP17.11■□□□□ 0.33
C6orf48-207ENST00000375642 KLK13Q9UKR3 277 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 PSMD13Q9UNM6 376 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 CLCA2Q9UQC9 943 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 WDR37Q9Y2I8 494 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 FAM169AQ9Y6X4 670 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 KNTC1P50748 2209 aa17.11■□□□□ 0.33
C6orf48-207ENST00000375642 OR52A4PA6NMU1 304 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 PRMT5O14744 637 aaPredicted RBP17.1■□□□□ 0.33
C6orf48-207ENST00000375642 TCEA3O75764 348 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 VIPP01282 170 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 SLC35G4P0C7Q5 338 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 ALDH4A1P30038 563 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 OR1D5P58170 312 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 UBE2IP63279 158 aaKnown RBP17.1■□□□□ 0.33
C6orf48-207ENST00000375642 CCL7P80098 99 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 NR1D2Q14995 579 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 CLCA4Q14CN2 919 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 HP1BP3Q5SSJ5 553 aaPredicted RBP17.1■□□□□ 0.33
C6orf48-207ENST00000375642 RNF187Q5TA31 235 aaPredicted RBP17.1■□□□□ 0.33
C6orf48-207ENST00000375642 CDCP2Q5VXM1 449 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 ZNF449Q6P9G9 518 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 IGDCC3Q8IVU1 814 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 CXorf40BQ96DE9 158 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 GFM1Q96RP9 751 aaKnown RBP17.1■□□□□ 0.33
C6orf48-207ENST00000375642 LRRC1Q9BTT6 524 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 LRRN3Q9H3W5 708 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 IL1RAPL1Q9NZN1 696 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 ZNF624Q9P2J8 865 aaPredicted RBP17.1■□□□□ 0.33
C6orf48-207ENST00000375642 ZC3H7BQ9UGR2 993 aaKnown RBP17.1■□□□□ 0.33
C6orf48-207ENST00000375642 MSRB2Q9Y3D2 182 aa17.1■□□□□ 0.33
C6orf48-207ENST00000375642 RP1P56715 2156 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 AKAP13Q12802 2813 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 FAM149AA5PLN7 773 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 FAM221BA6H8Z2 402 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 B4GAT1O43505 415 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 OGNP20774 298 aaKnown RBP17.09■□□□□ 0.33
C6orf48-207ENST00000375642 SLC19A1P41440 591 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 ELK3P41970 407 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 CAV1Q03135 178 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 TARDBPQ13148 414 aaKnown RBP eCLIP17.09■□□□□ 0.33
C6orf48-207ENST00000375642 SPIDRQ14159 915 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 CRYMQ14894 314 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 RPE65Q16518 533 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 TYSND1Q2T9J0 566 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 SPANXN3Q5MJ09 141 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 ZNF470Q6ECI4 717 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 PTRHD1Q6GMV3 140 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms